Gene Information

Name : SBO_P062 (SBO_P062)
Accession : YP_406286.1
Strain :
Genome accession: NC_007608
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 47047 - 47349 bp
Length : 303 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTACGGAGTTTAAAGCCGAAGCCGTCAAAACGGTTCCTGAAAATCAGCTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTGTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCTGCAAGAAAAGGGCTCAATA
CACCAGGCTCCCGCACAGTGGCTGAGCTGGAATCTGAAGTTATGCAACTGCGTAAGGCTTTAAATGAAGCACGACTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCCCAGGAGTCGCTGAAAAATACGCGTTAG

Protein sequence : 
MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-37 93
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-37 93
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-37 92
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-37 92
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-37 92
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-37 92
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 2e-31 90
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 2e-31 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_P062 YP_406286.1 IS600 ORF1 VFG1707 Protein 1e-37 92