Gene Information

Name : SBO_P039 (SBO_P039)
Accession : YP_406263.1
Strain :
Genome accession: NC_007608
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 27733 - 28344 bp
Length : 612 bp
Strand : +
Note : -

DNA sequence : 
ATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGT
AAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCG
TCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGACGACATTC
GTGCTGGATGCTCTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTA
TGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACA
ACGCGATAGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTG
GAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGA
AGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence : 
MGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTF
VLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAIAESINGLYKAEVIHRKSWKNRAEV
ELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 4e-88 99
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-88 99
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 7e-88 99
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 6e-88 99
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 7e-71 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_P039 YP_406263.1 IS629 ORF2 VFG1715 Protein 2e-71 94