Gene Information

Name : SBO_P024 (SBO_P024)
Accession : YP_406248.1
Strain :
Genome accession: NC_007608
Putative virulence/resistance : Unknown
Product : IS orf, fragment
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17712 - 18017 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence : 
GTGGCGCAGATCGCCCGTGAAAACGGAATCAACGATAACCTGCTCTTCAACTGGCGCCATCAATACCGGAAAGGTGGCCT
GCTGCCTTCCGGAAAAAATATGCCTGCACTGCTTCCCGTGACGTTAACGCCGGAGCCGGATAATAAAATCCCGGCTCCGG
CACAGGAACCAGAGCAGATAAATACACCGTCCGACAGTCTGTGCTGTGAGCTGGTTCTGCCGGCCGGAACTCTCAGGCTT
AAAGGTAAACTGACGCCGGCGTTATTACAGATACTTATCCGCGAAATAAAAGGGAGCAGCCACTGA

Protein sequence : 
MAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
KGKLTPALLQILIREIKGSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-15 44
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 1e-15 44
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 3e-13 43
unnamed AAL99257.1 unknown Not tested LEE Protein 2e-13 43
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 2e-13 43
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-13 43
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-13 43
unnamed AAC31492.1 L0013 Not tested LEE Protein 2e-13 43
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 3e-13 43
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 3e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_P024 YP_406248.1 IS orf, fragment VFG1697 Protein 3e-16 44
SBO_P024 YP_406248.1 IS orf, fragment VFG1518 Protein 1e-13 43
SBO_P024 YP_406248.1 IS orf, fragment VFG1053 Protein 9e-14 43
SBO_P024 YP_406248.1 IS orf, fragment VFG1708 Protein 9e-14 43
SBO_P024 YP_406248.1 IS orf, fragment VFG0791 Protein 9e-14 43