Gene Information

Name : SDY_P051 (SDY_P051)
Accession : YP_406052.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 44973 - 45620 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence :
GTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGAC
CATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGCGGGTGG
CTGATTTTACTTACGCCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTG
GGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTC
CGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTAC
TGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTA
ATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCATACTCACGTGGGTGGACTGGTATAACAATCGACG
ATTGCTGGAAAGGCTGGGCTATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGG
CAGCCTGA

Protein sequence :
MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLRVADFTYASTWQGFVYVAFIIDVFAGYIV
GWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEV
IHRKSWKNRAEVELAILTWVDWYNNRRLLERLGYTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 9e-88 98
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 5e-92 98
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-91 98
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-91 98
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 5e-92 97
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-92 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-91 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-91 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-89 96
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-89 96
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-89 96
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-91 96
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 9e-89 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-88 94
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-90 94
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-88 94
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-88 94
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 4e-87 94
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-90 94
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-88 94
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 5e-88 93
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 1e-69 92
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-39 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P051 YP_406052.1 IS629 ORF2 VFG1602 Protein 3e-88 93
SDY_P051 YP_406052.1 IS629 ORF2 VFG1715 Protein 5e-70 92