Gene Information

Name : SDY_P050 (SDY_P050)
Accession : YP_406051.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : iso-IS1 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 44506 - 44778 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAGCGTTAACATTCATTGTCCTCGTTGTCAGTCTGCACAGGTCTACCGCCATGGTCAGAACCCTAAAGGCCATGA
CAGATTTCGCTGCCGTGACTGCCACCGCGTTTTTCAGCTCACTTACACTTATGAGGCCCGTAAGCCGGGCATTAAAGAGC
TGATCACTGAAATGGCCTTCAATGGCGCCGGGGTTCGCGATACCGCCAGGACACTGAAAATTGGCATTAACACCGTCATC
CGGACTTTAAAAAACTCACGCCAAAGCGAATAA

Protein sequence :
MASVNIHCPRCQSAQVYRHGQNPKGHDRFRCRDCHRVFQLTYTYEARKPGIKELITEMAFNGAGVRDTARTLKIGINTVI
RTLKNSRQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 8e-19 68
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 6e-19 68
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 1e-16 48
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 1e-16 48
insA AEZ06026.1 InsA Not tested AbaR24 Protein 1e-16 48
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 2e-16 48
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 2e-16 48
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 2e-16 48
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 5e-17 46
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 5e-17 46
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 9e-17 45
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 9e-17 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P050 YP_406051.1 iso-IS1 ORF1 VFG1690 Protein 3e-19 68