Gene Information

Name : insB (SDY_P041)
Accession : YP_406042.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 38236 - 38613 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence :
ATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGAC
GGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTTACCCTTTGACGTGG
TGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACG
CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTAGCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATC
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLLPFDVVIWMTDGWPLYESRLKGKLHVISKRYT
QRIERHNLNLRQHLARLGRKALSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 5e-55 99
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 5e-55 99
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 5e-55 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 2e-53 94
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 6e-53 92
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 6e-53 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 9e-52 91
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 3e-52 91
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 4e-52 91
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-50 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB YP_406042.1 IS1 ORF2 VFG0612 Protein 5e-51 89