Gene Information

Name : SDY_P034 (SDY_P034)
Accession : YP_406035.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Virulence
Product : putative reverse transcriptase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 29477 - 30604 bp
Length : 1128 bp
Strand : -
Note : -

DNA sequence : 
ATGTTCGACCAGCAACGTGATGGCAATCTATACAAGATCTGGAACCGGCTATGTTCGGGAACATGGTTTCCGCCACCAGT
GCTGGAAAAACGGATCCCGAAGTCGAATGGCAAGGAACGCATTCTGGGGATCCCAACAGTATCCGATCGAATTGCTCAGG
GAGCGATAAAACTTTTCATGGAAGAAAAGCTTGACCCGATTTTCCATGCTGATTCATATGGTTACCGACCAGGCAAATCA
GCTCATGACGCTCTGAAACAATGTGCCATCCGGTGCTGGCGTTATAGCTGGATACTGGAAGTGGACATCAGTGCGTTTTT
CGACCATGTGAGACATGATCTGGTGCTCAAAGCTCTGGAACACCACGGGATGCCTAAATGGGTCATCCTGTACTGTCGAC
GCTGGATGGAAGCGCCAATGCAGAGTTGTGAAAATGGAGAAGTAATAACCCGAACACGAGGCACTCCGCAGGGCGGGGTC
ATTAGTCCGCTACTTGCTAACTTGTTCCTTCACTATGCATTTGATTTGTGGATGGAAAGAGAATATCGGGGGGTACCGTT
TGAGAGGTACGCTGACGATATTGTAGTACATTGTTCACGAATGAGTGATGCAACAAGGCTGAAGAACAGGTTATCGGAGC
GCTTCTCGGAAGTCGGGCTGGTCCTGAATGCAGGGAAAACGAATACCGCCTACATTGACACGTTTAAAAGGAGAAACGTC
GCAACGAGTTTCACCTTTCTCGGATATGACTTCAAAGTGCGTACGCTGAAGAATTTCAAAGGCGAACGGTACCGAAAATG
CATGCCGGGTGCGTCAAATGCAGCAATGCGCAAAATAACAGAAACAATCAAGAAGTGGCGTATACATCGCTCAACAGCTG
AGAGTTTGCTGGATTTTGCGAGGCGCTACAATGCGATAGTGAGAGGCTGGATCGAGTACTACGGAAAGTTCTGGTCCAGA
AATTTCAACTATCGACTGTGGAGTGCAATGCAGTCACGTCTGCTCAAGTGGATGCAGTCTAAATACAGACTTTCGAACCG
GAAGGCTCAGCGAAAGCTGACGCTGGTAAGGAAGGAGGATCCGAAGCTATTTGTTCACTGGTATTTACTACGTGCATCAA
ATGAGTGA

Protein sequence : 
MFDQQRDGNLYKIWNRLCSGTWFPPPVLEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKS
AHDALKQCAIRCWRYSWILEVDISAFFDHVRHDLVLKALEHHGMPKWVILYCRRWMEAPMQSCENGEVITRTRGTPQGGV
ISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRMSDATRLKNRLSERFSEVGLVLNAGKTNTAYIDTFKRRNV
ATSFTFLGYDFKVRTLKNFKGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNAIVRGWIEYYGKFWSR
NFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEDPKLFVHWYLLRASNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 8e-174 99
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 3e-79 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P034 YP_406035.1 putative reverse transcriptase VFG1512 Protein 4e-174 99