Gene Information

Name : ipgB2 (SDY_P025)
Accession : YP_406026.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Virulence
Product : IpgB2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 20653 - 21228 bp
Length : 576 bp
Strand : +
Note : probably secreted by the Mxi-Spa secretion machinery

DNA sequence :
GTGATTATAATGCTTGGAACATCTTTTAATAATTTTGGAATCAGTTTATCTCACAAAAGATATTTTTCAGGAAAGGTGGA
TGAGATTATCCGCTGTACAATGGGGAAAAGGATAGTAAAAATATCATCAACCAAAATAAATACTAGTATTTTGAGCTCTG
TTTCAGAACAAATCGGTGAAAATATTACAGATTGGAAAAATGATGAAAAAAAAGTCTACGTATCCCGGGTGGTAAACCAA
TGTATTGATAAGTTTTGTGCAGAACACAGCCGAGAAATCGGCGATAACCTCCGTAAACAGATATTTAAACAGGTTGAGAA
AGATTATCGCATTTCTCTAGACATCAATGCTGCACAAAGTTCCATAAATCATCTTGTATCAGGAAGCAGTTATTTCAAAA
AGAAAATGGACGAACTTTGTGAAGGGATGAATAGAAGCGTTAAAAATGATACAACAAGCAATGTTGTAAATCTTATTTCC
GATCAGTTTTTTGAGAAAAATGTGCAATATATTGATCTAAAGAAACTACGTGGGAATATGAGTGACTATATTACAAATTT
AGAATCGCCTTTCTGA

Protein sequence :
MIIMLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKINTSILSSVSEQIGENITDWKNDEKKVYVSRVVNQ
CIDKFCAEHSREIGDNLRKQIFKQVEKDYRISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVVNLIS
DQFFEKNVQYIDLKKLRGNMSDYITNLESPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3599 YP_003223456.1 T3SS effector EspM Virulence LEE Protein 4e-41 49
unnamed CAI43854.1 hypothetical protein Not tested LEE Protein 3e-41 49
unnamed AAL60258.1 unknown Not tested LEE Protein 5e-42 49
trcA BAA36747.1 bfpT-regulated chaperone-like protein Not tested LIM Protein 1e-33 42