Gene Information

Name : SDY_P019 (SDY_P019)
Accession : YP_406020.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : putative IS orf, fragment
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 15233 - 15640 bp
Length : 408 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAACTCCCGGTGGTAAAAAAACGTCCCCGGCGGCCTAATTTTCCTTATGAATTTAAAATCGCCTTAGTGGAGCA
GTCACTGCAGCCCGGAGCCTGTGTGGCGCAGATCGCCCGTGAAAACGGAATCAACGATAACCTGCTCTTCAACTGGCGCC
ATCAATACCGGAAAGGTGGCCTGCTGCCTTCCGGAAAAAATATGCCTGCACTGCTTCCCGTGACGTTAACGCCGGAGCCG
GATAATAAAATCCCGGCTCCGGCACAGGAACCAGAGCAGATAAATACACCGTCCGACAGTCTGTGCTGTGAGCTGGTTCT
GCCGGCCGGAACTCTCAGGCTTAAAGGTAAACTGACGCCGGCGTTATTACAGATACTTATCCGCGAAATAAAAGGGAGCA
GCCACTGA

Protein sequence :
MPKLPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEP
DNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQILIREIKGSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 8e-23 45
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-23 45
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 5e-18 43
unnamed AAL99257.1 unknown Not tested LEE Protein 4e-18 43
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 4e-18 43
unnamed AAL08462.1 unknown Not tested SRL Protein 7e-18 43
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-18 43
unnamed AAC31492.1 L0013 Not tested LEE Protein 3e-18 43
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 5e-18 43
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 5e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P019 YP_406020.1 putative IS orf, fragment VFG1697 Protein 2e-23 45
SDY_P019 YP_406020.1 putative IS orf, fragment VFG1518 Protein 2e-18 43
SDY_P019 YP_406020.1 putative IS orf, fragment VFG1708 Protein 1e-18 43
SDY_P019 YP_406020.1 putative IS orf, fragment VFG1053 Protein 3e-18 43
SDY_P019 YP_406020.1 putative IS orf, fragment VFG0791 Protein 1e-18 43