Gene Information

Name : SDY_P195 (SDY_P195)
Accession : YP_406196.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS600 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 158350 - 158970 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence :
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGATAACGGAATTATCGTCGG
TCGTGACAGACTGGCACGTCTTCGTAAGGAGCTGAGGCTGCACTGTAAGCAGAAACGCAAGTTCAGGGCGACCACAAGCT
CTGACCACAATCTGCCGGTTACGCCGAATCTGCTGAATCAGAACTTTACGCCCACAGCACCTAATCAGGTCTGGGTCGCA
GATATAACGTATATTGCCACCCGGGAAGGATGGCTGTATCTCGCTGGCGTCAAAGATGTTTATACGTGCGAAATTGTCGG
TTACGCCATGGGAGAGCGCATGACGAAAGAGTTGACGGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCACCCACCTG
CCGGGCTAATCCACCACTCCGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATGCAGGAGCAGTCTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAATCTTCTGGGGAACGCTGAAAAATGAAAG
CCTGAGCCACTATCGTTTTAAGAGCCGGGATATTTCGTCAGCATACGGGAAAACTGATTGA

Protein sequence :
MAHIRTRETYGTRRLQTELADNGIIVGRDRLARLRKELRLHCKQKRKFRATTSSDHNLPVTPNLLNQNFTPTAPNQVWVA
DITYIATREGWLYLAGVKDVYTCEIVGYAMGERMTKELTGKALFMALRSQHPPAGLIHHSDRGSQYCAYDYRVMQEQSGL
KTSMSRKGNCYDNAPMEIFWGTLKNESLSHYRFKSRDISSAYGKTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 8e-87 92
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 8e-87 92
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-86 91
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-86 91
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-86 91
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-86 91
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-86 91
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-86 91
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-85 90
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-37 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 44
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-20 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P195 YP_406196.1 IS600 ORF2 VFG1706 Protein 8e-87 91
SDY_P195 YP_406196.1 IS600 ORF2 VFG1484 Protein 2e-20 42