Gene Information

Name : spa29 (SDY_P192)
Accession : YP_406193.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Virulence
Product : Spa29
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 155713 - 156483 bp
Length : 771 bp
Strand : +
Note : component of the Mxi-Spa secretion machinery

DNA sequence : 
ATGGACATTTCAAGCTGGTTCGAAAGTATTCATGTGTTTTTAATACTCCTGAACGGCGTTTTTTTTAGATTGGCTCCATT
ATTTTTCTTTCTTCCATTTTTAAATAACGGTATAATTTCTCCATCTATTAGAATACCTGTGATTTTTCTTGTTGCATCAG
GATTAATTACTTCTGGTAAGGTAGACATAGGTTCTTCTGTTTTTGAACATGTTTATTTCCTTATGTTCAAGGAAATAATT
GTTGGCCTCCTTCTCTCTTTTTGCTTGTCTCTTCCCTTTTGGATATTTCATGCTGTTGGTAGCATTATTGACAACCAGCG
TGGGGCAACGCTTAGTAGTTCAATTGATCCTGCCAATGGTGTTGATACGTCTGAGTTAGCAAAATTTTTCAATCTTTTTT
CTGCAGTTGTATTTCTATACAGTGGTGGTATGGTCTTTATTTTAGAATCCATACAATTGTCTTATAACATATGCCCGTTA
TTTTCTCAATGTTCTTTCCGTGTCTCAAATATCTTAACATTTCTGACTTTATTGGCAAGTCAGGCTGTTATTTTAGCCAG
TCCTGTTATGATAGTATTGTTACTATCAGAAGTATTACTTGGTGTATTATCGAGATTTGCTCCGCAGATGAATGCTTTTT
CCGTATCATTAACTATTAAAAGTTTACTTGCAATATTTATTATTTTCATCTGCTCTTCTACTATTTACTTTTCTAAAGTT
CAATTTTTCCTCGGTGAACATAAATTTTTCACAAATCTATTTGTTAGATAA

Protein sequence : 
MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIRIPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEII
VGLLLSFCLSLPFWIFHAVGSIIDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLTIKSLLAIFIIFICSSTIYFSKV
QFFLGEHKFFTNLFVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-29 50
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-29 50
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 6e-29 50
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-27 49
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 2e-20 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spa29 YP_406193.1 Spa29 VFG1014 Protein 3e-95 100
spa29 YP_406193.1 Spa29 VFG0549 Protein 2e-29 50