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Name : ipgF (SDY_P173) Accession : YP_406174.1 Strain : Genome accession: NC_007607 Putative virulence/resistance : Virulence Product : IpgF Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 140443 - 140901 bp Length : 459 bp Strand : + Note : periplasmic protein, similar to the catalytic site of lyzozymes DNA sequence : ATGTCCCGTTTCGTATTTATTTTGCTGTGTTTTATCCCACATTTAGGGAGAGCTGATTGTTGGGATAAGGCTGGTGAAAG GTACAACATTCCATCGAGTTTGTTAAAAGCGATTGCGGAAAAAGAATCCGGATTTAATAAATCTGCAGTCAATGTTAATA ACAATGGAAGTAAAGATTATGGTATAATGCAAATAAATGACTTTCATTCTAAAAGACTTAGAGAAATGGGATATACTGAG GAAATGCTAATTAGTCATCCATGTCTTTCTGTACATTATGCAGCAAAGTTATTAAATGAGTTTATGCTGATGTATGGAAG AGGGTGGGAGGCTGTTGGTGCCTATAATGCAGGAACATCTCCGAAAAAGAAAAAAGAAAGATTAAAGTACGCAGAGGATA TCTATAAACGCTATTTGCGGATAGCAGCAGAGAGCAAGCAGAATAATCGAAGGATATAA Protein sequence : MSRFVFILLCFIPHLGRADCWDKAGERYNIPSSLLKAIAEKESGFNKSAVNVNNNGSKDYGIMQINDFHSKRLREMGYTE EMLISHPCLSVHYAAKLLNEFMLMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpa2 | NP_640772.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 6e-13 | 45 |
| iagB | NP_457271.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-26 | 44 |
| iagB | NP_806480.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-26 | 44 |
| iagB | YP_217796.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-26 | 44 |
| iagB | NP_461798.1 | invasion protein precursor | Virulence | SPI-1 | Protein | 3e-26 | 44 |
| hpaH | AAL78295.1 | HpaH precursor | Virulence | Hrp PAI | Protein | 1e-12 | 43 |
| hpaH | YP_362172.1 | transglycosylase HpaH | Virulence | Hrp PAI | Protein | 2e-12 | 43 |
| hpa2 | AAF61278.1 | Hpa2 precursor | Virulence | Hrp PAI | Protein | 2e-12 | 43 |
| XC_3001 | YP_244069.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 1e-11 | 41 |
| hpa2 | NP_636615.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 1e-11 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ipgF | YP_406174.1 | IpgF | VFG0994 | Protein | 4e-67 | 98 |
| ipgF | YP_406174.1 | IpgF | VFG0539 | Protein | 9e-27 | 44 |
