Gene Information

Name : SDY_P153 (SDY_P153)
Accession : YP_406154.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS600 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 119550 - 120263 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGAAGATAACGGAATTATCGTCGG
TCGTGACAGACTGGCACGTCTTCGTAAGGAGCTGAGGCTGCACTGTAAGCAGAAACGCAAGTTCAGGGCGACCACAAACT
CTGACCACAATCTGCCGGTTACGCCGAATCTGCTGAATCAGAACTTTACGCCCACAGCACCTAATCAGGTCTGGGTCGCA
GATATAACGTATGTTGCCACCCGGGAAGGATGGCTGTATCTCGCCGGCGTCAAAGATGTTTATACGTGCGAAATTGTCGG
TTACGCCATGGGAGAGCGCATGACGAAAGAGTTGACGGGGAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTG
CCGGGCTAATCCACCACACCGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAAAG
CCTGAGCCACTATCGTTTTAAGAGCCGGGATGAGGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTC
AGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGATAAAATATTATCAGATGACTGCTTAG

Protein sequence :
MAHIRTRETYGTRRLQTELEDNGIIVGRDRLARLRKELRLHCKQKRKFRATTNSDHNLPVTPNLLNQNFTPTAPNQVWVA
DITYVATREGWLYLAGVKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHTDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFRIKYYQMTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-105 94
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-105 94
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-104 93
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-104 92
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-104 92
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-104 92
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-104 92
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-104 92
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-104 92
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-46 46
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 9e-46 46
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-46 46
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-40 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-40 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-40 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P153 YP_406154.1 IS600 ORF2 VFG1706 Protein 8e-105 92
SDY_P153 YP_406154.1 IS600 ORF2 VFG1631 Protein 3e-41 45