Gene Information

Name : SDY_P143 (SDY_P143)
Accession : YP_406144.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 112235 - 112537 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTACGGAGTTTAAAGCCGAAGCCGTCAAAACGGTTCCTGAAAATCAGCTTTCGAT
CAGTGAAGGCCCTTCCCGATTATCTGTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCAAGAAAAGGGCTCAATA
CACCAGGCTCCCGCACAGTGGCTGAGCTGGAATCTGAAGTTATGCAACTGCGTAAGGCTTTAAATGAAGCACGACTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCCCAGGAGTCGCTGAAAAATACGCGTTAG

Protein sequence : 
MSRKTQRYSTEFKAEAVKTVPENQLSISEGPSRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-37 92
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-37 92
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-37 91
unnamed AAF09021.1 unknown Not tested SHI-O Protein 4e-37 91
unnamed AAF09029.1 unknown Not tested SHI-O Protein 4e-37 91
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-37 91
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 3e-31 89
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 3e-31 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P143 YP_406144.1 IS600 ORF1 VFG1707 Protein 1e-37 91