Gene Information

Name : SDY_P134 (SDY_P134)
Accession : YP_406135.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : iso-IS1 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 105382 - 105654 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAGCGTTAACATTCATTGTCCTCGTTGTCAGTCTGCACAGGTCTACCGCCATGGTCAGAACCCTAAAGGCCATGA
CAGATTTCGCTGCCGTGACTGTCACCGCGTTTTTCAGCTCACTTACACTTATGAGGCCCGTAAGCCGGGCATTAAAGAGC
TGATCACTGAAATGGCCTTCAATGGCGCCGGGGTTCGCGATACCGCCAGGACACTGAAAATTGGCATTAACACCGTCATC
CGGACTTTAAAAAACTCACGCCAAAGCAAATAA

Protein sequence :
MASVNIHCPRCQSAQVYRHGQNPKGHDRFRCRDCHRVFQLTYTYEARKPGIKELITEMAFNGAGVRDTARTLKIGINTVI
RTLKNSRQSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 8e-19 68
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 7e-19 68
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 1e-16 47
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 1e-16 47
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 8e-17 47
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 8e-17 47
insA AEZ06026.1 InsA Not tested AbaR24 Protein 8e-17 47
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 1e-16 47
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 4e-17 46
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 4e-17 46
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 7e-17 44
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 7e-17 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P134 YP_406135.1 iso-IS1 ORF1 VFG1690 Protein 3e-19 68