Gene Information

Name : SDY_P116 (SDY_P116)
Accession : YP_406117.1
Strain :
Genome accession: NC_007607
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 93224 - 93526 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATCAAAAAAAACAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDISKKTTAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 4e-39 98
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 4e-39 98
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-39 97
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-38 97
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-38 97
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 6e-39 97
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 6e-33 96
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 6e-33 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_P116 YP_406117.1 IS600 ORF1 VFG1707 Protein 3e-39 97