Gene Information

Name : kdpE (SDY_0629)
Accession : YP_402311.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : DNA-binding transcriptional activator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 590523 - 591200 bp
Length : 678 bp
Strand : -
Note : transcriptional effector; response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport

DNA sequence :
GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCG
CGTCTTTGAGGCCGAAACGCTGCAACGCGGCTTGCTGGAAGCGGCAACCCGTAAGCCAGATTTGATTATTCTCGATCTCG
GCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCGCGGTGCCGGTGATTGTGCTTTCCGCA
CGCAGCGAAGAGAGCGACAAAATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTGAGTAAGCCGTTTGGCATTGGCGA
ATTGCAGGCCCGTATGCGCGTCGCTTTACGCCGCCACTCCGCCACCGCTGCGCCCGATCCGCTGGTGAAATTCTCCGATG
TTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACGCCGATTGAATTCCGCCTGCTG
GCGGTGCTGCTGAATAATGCCGAGAAAGTGCTCACCCAGCGCCAACTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGA
ACACAGTCATTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCCGCTCGCCCCAGCCATTTCA
TTACTGAAACCGGTATTGGTTATCGGTTTATGCTTTAG

Protein sequence :
MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSA
RSEESDKIAALDAGADDYLSKPFGIGELQARMRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL
AVLLNNAEKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPSHFITETGIGYRFML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-24 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 4e-24 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 4e-24 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-24 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 4e-24 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-24 41