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Name : SDY_4479 (SDY_4479) Accession : YP_405846.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Unknown Product : ISSfl4 ORF3 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 4195938 - 4197476 bp Length : 1539 bp Strand : - Note : Code: L; COG: COG3436 DNA sequence : ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA GGAAAAGCTGAGCAACCGGGTGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA CCGCCGAACAGCTGGAGTTGATGCGTAGTGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT GACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTT CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGATGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG GGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG GCATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC AGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACC CTGTCGCGACACTCAGAGTTAGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACGTACTATGCGAACGA TGGCTGGGTGGAAATCGACAACAACATCGCTGAAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTCT TCGGCTCTGACCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCA GAAAGCTACCTTCGCCATGTGCCTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTGGCGCAT AGCACTGCCAGCTGAATAA Protein sequence : MNDISSDDIFLLKQRLAEQEALIHALQEKLSNRVREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMT DGKLHADDTPVQVLMPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDP ESYLRHVPGVIADWPVNRVSELLPWRIALPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 0.0 | 99 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 0.0 | 99 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 99 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 0.0 | 99 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 99 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 99 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 0.0 | 99 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 0.0 | 99 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 0.0 | 99 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 0.0 | 99 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 98 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 0.0 | 98 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 0.0 | 96 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 4e-164 | 92 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 8e-152 | 64 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 1e-155 | 64 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 1e-155 | 64 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 6e-107 | 63 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 3e-141 | 60 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 4e-102 | 59 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 4e-118 | 55 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 6e-129 | 55 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 5e-118 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SDY_4479 | YP_405846.1 | ISSfl4 ORF3 | VFG0793 | Protein | 0.0 | 99 |
| SDY_4479 | YP_405846.1 | ISSfl4 ORF3 | VFG1051 | Protein | 0.0 | 96 |
| SDY_4479 | YP_405846.1 | ISSfl4 ORF3 | VFG1700 | Protein | 2e-164 | 92 |
| SDY_4479 | YP_405846.1 | ISSfl4 ORF3 | VFG1513 | Protein | 3e-107 | 63 |
| SDY_4479 | YP_405846.1 | ISSfl4 ORF3 | VFG1736 | Protein | 8e-125 | 63 |
