Gene Information

Name : SDY_4306 (SDY_4306)
Accession : YP_405693.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4036046 - 4036480 bp
Length : 435 bp
Strand : -
Note : orf

DNA sequence :
ATGCGAATTCTGAACTGTTATATGACGAATGACAGCAAAGGCCATTTTGTTACGGCGAAAGAAGCTGCGAAGCACAACCG
ACAGGACGTTTTGTGCTGTGTGTCCTGTGGATGCCCGTTAACACTTCAGCGGGGCAATGACGGACAACCACCGTGGTTTG
AACATGACCAGATGACTGTCGCTGAAAAAATCCTGCTGCGATGTACCTGGCTTGACCCGGCAGAGAAAGAGGCCCGTCGT
TTGCATCTGCAGGGCATGACGGTTCCGGATTATACGGTGAAGGTGAGAAAGTGGTTTTGTGTGATGTGTGACGAAGATTA
TGAGGGGGAAAAGTGCTGCCCACGCTGCGGTACCGGGGTATACAGCAGAGCGTGGGGGCGGCAGGAGGTGCCGTCGGAAG
ATGCCAGGGCTGATAATCCGTTACAGAGGCTGTAA

Protein sequence :
MRILNCYMTNDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQRGNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARR
LHLQGMTVPDYTVKVRKWFCVMCDEDYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08463.1 unknown Not tested SRL Protein 3e-65 99
unnamed ADD91716.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-63 98
unnamed CAI43832.1 hypothetical protein Not tested LEE Protein 2e-63 97
APECO1_1082 YP_853102.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-55 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_4306 YP_405693.1 hypothetical protein VFG1054 Protein 1e-65 99