|
Name : SDY_3946 (SDY_3946) Accession : YP_405371.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Unknown Product : iso-IS1 ORF2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 3679314 - 3679709 bp Length : 396 bp Strand : + Note : Code: L; COG: COG1662 DNA sequence : GTGGCGCTTATCTGCGAACTTGATGAGCAATGGAGTTTCGTTGGCAGTAAAGCCCGGCAACACTGGCTCTGGTACGCGTA TAACACCAAAACAGGGGGGGGACTGGCCTACACTTTTGGTCCCCGTACCGATGAAACCTGCCGGGAACTACTGGCACTGC TTACGCCATTCAACATCGGCATGCTCACCAGCGACGACTGGGGCAGCTATGGCCGGGAGGTGCCGAAGGATAAGCATCTG ACCGGAAAAATATTCACCCAACGGATTGAGCGCAATAACCTGACGCTGCGCACCCGCATTAAGCGCTTGGCTCGTAAAAC AATCTGCTTCTCGCGTTCAGTAGAGATCCACGAAAAAGTCATCGGGACGTTTATTGAAAAACACATGTTCTACTAA Protein sequence : MALICELDEQWSFVGSKARQHWLWYAYNTKTGGGLAYTFGPRTDETCRELLALLTPFNIGMLTSDDWGSYGREVPKDKHL TGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGTFIEKHMFY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1562 | NP_287066.1 | hypothetical protein | Not tested | TAI | Protein | 9e-43 | 71 |
| Z1123 | NP_286658.1 | hypothetical protein | Not tested | TAI | Protein | 9e-43 | 71 |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 6e-26 | 45 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 6e-26 | 45 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 6e-26 | 45 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | Protein | 8e-26 | 45 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-25 | 44 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 2e-25 | 44 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 1e-25 | 44 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 2e-25 | 44 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-25 | 43 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 2e-25 | 43 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 3e-25 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SDY_3946 | YP_405371.1 | iso-IS1 ORF2 | VFG0612 | Protein | 6e-26 | 43 |
