|
Name : SDY_0347 (SDY_0347) Accession : YP_402051.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Unknown Product : iso-IS1 ORF2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 338249 - 338644 bp Length : 396 bp Strand : - Note : Code: L; COG: COG1662 DNA sequence : GTGGCGCTTATCTGCGAACTTGATGAGCAATGGAGTTTCGTTGGCAGTAAAGCCCGGCAACACTGGCTCTGGTACGCGTA TAACACCAAAACAGGGGGGGTACTGGCCTACACTTTTGGTCCCCGTACCGATGAAACCTGCCGGGAACTACTGGCACTGC TTACGCCATTCAACATCGGCATGCTCACCAGCGACGACTGGGGCAGCTATGGCCGGGAGGTGCCGAAGGATAAGCATCTG ACCGGAAAAATATTCACCCAACGGATTGAGCGCAATAACCTGACGCTGCGCACCCGCATTAAGCGCTTGGCTCGTAAAAC AATCTGCTTCTCGCGTTCAGTAGAGATCCACGAAAAAGTCATCGGGACGTTTATTGAAAAACACATGTTCTACTAA Protein sequence : MALICELDEQWSFVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDETCRELLALLTPFNIGMLTSDDWGSYGREVPKDKHL TGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGTFIEKHMFY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1123 | NP_286658.1 | hypothetical protein | Not tested | TAI | Protein | 3e-43 | 72 |
| Z1562 | NP_287066.1 | hypothetical protein | Not tested | TAI | Protein | 3e-43 | 72 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 2e-26 | 46 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 3e-26 | 46 |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 2e-26 | 46 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 2e-26 | 46 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | Protein | 2e-26 | 46 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 8e-26 | 45 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 1e-25 | 44 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 7e-26 | 44 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 7e-26 | 44 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 6e-26 | 44 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 6e-26 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SDY_0347 | YP_402051.1 | iso-IS1 ORF2 | VFG0612 | Protein | 2e-26 | 44 |
