Gene Information

Name : insB (SDY_0032)
Accession : YP_401760.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 30119 - 30496 bp
Length : 378 bp
Strand : +
Note : Code: L; COG: COG1662

DNA sequence : 
ATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGTTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGAC
GGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCCCCCTTTGACGTGG
TGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACG
CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATC
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACCATCAATAA

Protein sequence : 
MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYT
QRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 6e-55 99
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 6e-55 99
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 6e-55 99
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 2e-53 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-53 95
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 8e-53 93
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 8e-53 93
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 8e-52 92
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 4e-52 92
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 5e-52 92
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-50 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB YP_401760.1 IS1 ORF2 VFG0612 Protein 6e-51 90