Gene Information

Name : gspJ (SDY_3099)
Accession : YP_404606.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 2875056 - 2875625 bp
Length : 570 bp
Strand : +
Note : Code: U; COG: COG4795

DNA sequence : 
ATGCTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAG
CGCCGTCACCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACCCAAATGA
TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGAGAGAACCAGCGTTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGT
GAAGGAATGCGTTTTGTACGTGGCGGCGTGGTTAATCCGTTGATGCGTCTGCCACGCAGCAATCTGCTCACCGTCGGTTA
CCGCATTCATGACGGTTATCTCGAACGGTTAGTCTGGCCGCTGACCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAA
AGTTGATTCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCG
ATCCCTGTGGCAGTGCGCATGACCCTGCATTCGCCGCAATGGGGCGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCA
ATTATCATGA

Protein sequence : 
MLVAIAIFASLALMAQQVTNGVTRVNSAVTGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASES
EGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLVWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQA
IPVAVRMTLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-83 97
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-83 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_404606.1 type II secretion protein VFG2053 Protein 2e-86 100