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Name : gspF (SDY_3095) Accession : YP_404602.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Virulence Product : type II secretion protein Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2872393 - 2873592 bp Length : 1200 bp Strand : + Note : Code: NU; COG: COG1459 DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGTATGATTGAGGCGGATTCCGAGCGTCA TGCCCGCCAGTTGTTGCGCGGTAAAGAGCTTATCCCCGTGCACATTGAAGCCCGGATGAATGCTTCGTCAGGGGGGATGT TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGGCGGCAGATCTGGCGCTGTTCACGTGCCAACTGGCAACGTTAGTA CAGGCAGCAATACCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTACACCCTGTCGGATAGCCTGCGCGAACATCCCCGCGTCTTTGATTCCCTGT TTTGTTCGATGGTGGCTGCCGGAGAAAAATCCGGGCATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG CGACAGCGCCTGAAATCACGTCTATTGCAGGCCATGCTCTATCCGCTGGTTCTGCTGGTGGTGGCAACGAGCGTGGTCAC TATTTTGCTGGCGGCAGTGGTGCCGAAAATCATCGAACAGTTCGATCACCTCGGACACGCGCTGCCCGCCACCACCCGCG CGCTTATCGCCATGAGTGACGCGTTACAGGCCAGCGGCGTTTACTGGCTGGCGGGATTGCTGGCGCTTCTGGTGTTGGGG CAACGGCTACTCAAAAATCCTGCGATGCTCCTGCGCTGGGATAAAACCTTGCTGCGCCTGCCTGTGACGGGGCGTGTTGC GCGCGGGCTGAATACGGCGCGGTTTTCCCGCACATTAAGCATTCTCACCGCCAGCAGTGTTCCGCTACTGGAAGGCATTC AGACCGCTGCCGCCGTGTCGGCAAATCGCTATGTCGAACAACAACTACTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGTCTGCGCGCCGCGCTGGCGGAGTTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG CGAACTGGAAACCATGCTCGAACAGGCCGCAGTTAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTGGGGC TGTTTGAGCCTGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTCGAGCCGATGCTGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSERHARQLLRGKELIPVHIEARMNASSGGMLQRRRHAHRRVAAADLALFTCQLATLV QAAIPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQRLKSRLLQAMLYPLVLLVVATSVVTILLAAVVPKIIEQFDHLGHALPATTRALIAMSDALQASGVYWLAGLLALLVLG QRLLKNPAMLLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-147 | 97 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-147 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_404602.1 | type II secretion protein | VFG2049 | Protein | 1e-151 | 100 |
| gspF | YP_404602.1 | type II secretion protein | VFG0181 | Protein | 2e-64 | 46 |
| gspF | YP_404602.1 | type II secretion protein | VFG1870 | Protein | 2e-56 | 41 |
