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Name : gspD (SDY_3093) Accession : YP_404600.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Virulence Product : type II secretion protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2869065 - 2870900 bp Length : 1836 bp Strand : + Note : Code: NU; COG: COG1450 DNA sequence : ATGGGGCCGGGCGTACAGGGGAAAGTGAGTATTCGCACCATGACCCCGCTCAATGAACGCCAGTATTACCAGCTATTCCT TAACCTGCTGGAAGCACAGGGGTATGCCGTCGTACCGATGGAAAACGACGTGCTGAAGGTGGTGAAATCCAGCGCTGCGA AAGTCGAGCCGCTGCCGCTGGTCGGTGAAGGCAGCGACAACTACGCGGGCGATGAAATGGTCACCAAAGTAGTGCCGGTA CGCGAGCTGGCACCGATTCTGCGCCAGATGATCGACAGCGCAGGCTCAGGCAACGTTGTTAATTACGATCCCTCCAACGT GATTATGCTCACCGGACGCGCCTCCGTTGTGGAGCGCCTGACGGAAGTGATCCAGCGCGTGGATCACGCGGGTAATCGCA CCGAAGAGGTGATCCCGCTGGATAACGCCTCGGCTTCGGAAATCGCCCGCGTGCTGGAAAGCCTGACGAAAAACAGCGGC GAGAACCAGCCTGCGACGCTGAAATCTCAAATTGTCGCCGACGAACGCACCAACAGTGTGATTGTCAGTGGTGACCCGGC CACGCGGAACAAAATGCGCCGCCTGATCCGTCGCCTGGACTCAGAAATGGAGCGCAGCGGCAACAGCCAGGTGTTCTATC TCAAATACAGCAAAGCCGAAGATCTGGTCGATGTACTGAAGCAGGTCAGCGGCACGCTCACGGCGGCTAAAGAAGAGGCG GAAGGCACGGTCGGTAGCGGGCGTGAGGTTGTCTCCATCGCAGCCAGCAAACACAGTAATGCCCTGATTGTAACCGCGCC GCAGGACATCATGCAGTCGCTGCAAAGCGTGATTGAACAACTGGATATTCGCCGTGCTCAGGTGCACGTCGAGGCGTTGA TCGTGGAAGTGGCCGAAGGCAGTAATATCAACTTCGGCGTGCAGTGGGCGTCGAAAGATGCCGGATTAATGCAGTTTGCT AATGGTACGCAGATCCCTATCGGTACGCTGGGGGCAGCCATTTCTCAGGCGAAACCGCAGAAAGGCTCGACGGTGATCAG TGAAAACGGCGCTACCACCATTAATCCGGATACCAACGGCGATCTCTCCACGCTCGCCCAGCTTCTTTCCGGCTTTAGCG GTACGGCGGTTGGCGTGGTGAAAGGCGACTGGATGGCGCTGGTACAGGCGGTTAAAAACGACTCCAGCTCGAACGTTCTC TCCACGCCGAGCATCACCACGCTGGACAACCAGGAAGCCTTCTTCATGGTGGGTCAGGACGTTCCGGTATTAACCGGCTC TACCGTTGGCTCCAATAACAGTAATCCTTTCAATACAGTAGAAAGGAAAAAAGTCGGCATCATGCTGAAAGTCACGCCGC AGATTAACGAAGGTAACGCGGTACAGATGGTGATTGAGCAGGAAGTCTCGAAGGTGGAAGGACAGACCAGCCTCGACGTA GTGTTTGGTGAGCGCAAACTGAAAACCACCGTGCTGGCTAACGATGGTGAACTGATTGTGCTTGGTGGTCTGATGGACGA CCAGGCGGGAGAAAGTGTGGCGAAAGTGCCGCTGCTTGGCGATATCCCATTGATTGGTAACCTGTTTAAATCGACGGCGG ATAAAAAAGAAAAACGTAACCTGATGGTGTTTATCCGTCCGACCATTCTGCGTGACGGTATGGCGGCAGACGGCGTGTCG CAGCGCAAATATAACTATATGCGCGCCGAACAGATCTATCGCGATGAGCAAGGCTTAAGCCTGATGCCGCACACCGCGCA GCCGGTACTGCCAGCGCAAAACCAGGCCTTACCGCCGGAAGTACGTGCGTTCCTTAATGCCGGGAGAACGCGTTAA Protein sequence : MGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPV RELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSG ENQPATLKSQIVADERTNSVIVSGDPATRNKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEA EGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFA NGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVL STPSITTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDV VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVS QRKYNYMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPEVRAFLNAGRTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 0.0 | 99 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | YP_404600.1 | type II secretion protein | VFG2047 | Protein | 0.0 | 100 |
