Gene Information

Name : ygaA (SDY_2906)
Accession : YP_404427.2
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : anaerobic nitric oxide reductase transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3604
EC number : -
Position : 2685497 - 2687011 bp
Length : 1515 bp
Strand : -
Note : Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon

DNA sequence :
ATGAGTTTTTCCGTTGATGTGCTGGCGAATATCGCCATCGAATTGCAGCGTGGGATTGGTCATCAGGATCGTTTTCAGCG
CCTGATCACCACGCTGCGTCAGGTGCTGGAGTGTGATGCGTCTGCGTTGCTACGTTACGACTTGCGGCAGTTTATTCCGC
TTGCCATCGACGGGCTGGCGAAGGATGTACTCGGTAGACGCTTTGCGCTGGAAGGTCATCCACGGCTGGAAGCGATTGCC
CGCGCGGGTGATGTGGTGCGCTTTCCCGCAGACAGCGGATTGCCCGATCCCTATGACGGTTTGATTCCAGGGCAGGAGAG
TCTGAAGGTTCACGCCTGCGTTGGTCTGCCGCTGTTTGCCGGGCAAAACCTGATCGGCGCATTGACGCTCGACGGAATGC
AGCCCGATCAGTTCGATGTTTTCAGCGACGAAGAGTTACGGCTGATTGCCGCGTTGGCGGCGGGAGCGTTAAGCAATGCG
TTGCTGATTGAACAACTGGAAAGCCAGAATATGCTGCCAGGCGATGCCGCTCCATTTGAAGCGGTGAAACAGACGCAGAT
GATCGGTCTGTCGCCAGGCATGACGCAACTGAAAAAAGAGATTGAGATTGTGGCGGCGTCCGATCTCAACGTCCTGATCA
GCGGTGAGACGGGAACCGGTAAGGAGCTGGTGGCGAAAGCGATTCATGAGGCCTCGCCACGGGCGGTGAATCCGCTGGTC
TATCTCAACTGTGCCGCACTGCCGGAAAGTGTGGCGGAAAGTGAGTTGTTCGGGCATGTGAAAGGAGCGTTTACTGGCGC
TATCAGTAACCGCAGCGGGAAGTTTGAAATGGCGGATAACGGCACGCTGTTTCTCGATGAGATCGGCGAGTTGTCGTTGG
CATTGCAGGCCAAGCTGCTGAGAGTGTTGCAGTATGGCGATATTCAGCGCGTTGGCGATGACCGTAGTTTGCGGGTCGAT
GTGCGCGTGCTGGCGGCGACTAACCGCGATTTACGCGAAGAGGTGCTGGCAGGGCGATTTCGCGCTGACTTGTTCCACCG
CCTGAGCGTGTTTCCACTTTCGGTGCCGCCGCTGCGTGAGCGGGGCGATGATGTCATTCTGCTGGCGGGGTATTTCTGCG
AGCAGTGTCGTTTGCGGCAGGGGCTCTCCCGCGTGGTATTAAGTGCCGGAGCGCGAAATTTACTGCAACACTACAGTTTT
CCGGGAAACGTGCGCGAACTGGAACATGCTATTCATCGGGCGGTAGTGCTGGCGAGAGCCACCCGCAACGGCGATGAAGT
GATTCTTGAGGCGCAACATTTTGCTTTTCCTGAGGTGACGTTGCCGCCGCCAGAAGCGGCGGCGGTGCCCGTTGTTAAGC
AAAACCTGCGTGAAGCGACAGAAGCGTTCCAGCGTGAAACTATTCGTCAGGCACTGGCACAAAATCATCACAACTGGGCT
GCCTGCGCGCGGATGCTGGAAACCGACGTCGCCAACCTGCATCGGCTGGCGAAACGTCTGGGATTGAAGGATTAA

Protein sequence :
MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDLRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIA
RAGDVVRFPADSGLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
LLIEQLESQNMLPGDAAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVD
VRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSF
PGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA
ACARMLETDVANLHRLAKRLGLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 3e-94 47