Gene Information

Name : gutQ (SDY_2905)
Accession : YP_404426.2
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 2684535 - 2685500 bp
Length : 966 bp
Strand : +
Note : catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate

DNA sequence :
ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAATTGCAGGAAGCAAGCCGTTTACCGGAACGTCT
GGGCGATGATTTTTTTCGCGCCGCCAATATCATCCTGCACTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGG
GCCACATTGGTAAGAAAATCGCCGCAACACTTGCCAGTACCGGCACACCGGCTTTTTTTGTCCATCCGGCAGAAGCACTG
CACGGCGATCTGGGGATGATCGAAAGCCGCGATGTGATTCTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCT
GATTATTCCGCGTCTGGAAGACAAATCTATCGCGCTGCTGGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGG
CGAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACC
CTGATGATGGGCGACGCACTAGCGATGGCAGTCATGCAGGCGCGCGGTTTTAATGAAGAAGATTTTGCCCGCTTCCACCC
AGCCGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCATCATCTGATGCGTCGTGATGACGCTATCCCACAGGTAGCGT
TAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGCCGCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAA
CAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTTAATGA
AGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAA
TCACTGCCGCACCGGTGGTGGATGAAAACGGCAAACTCACCGGCGCAATAAACCTGCAGGATTTCTATCAGGCCGGGATT
ATTTAA

Protein sequence :
MSEALLNAGRQTLMLELQEASRLPERLGDDFFRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL
HGDLGMIESRDVILFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
LMMGDALAMAVMQARGFNEEDFARFHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ
QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-43 41
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 6e-43 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 9e-43 41