Gene Information

Name : SDY_2840 (SDY_2840)
Accession : YP_404370.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2634188 - 2634493 bp
Length : 306 bp
Strand : +
Note : Code: L; COG: COG2963; orf

DNA sequence :
GTGGCGCAGATCGCCCGTGAAAACGGAATCAACGATAACCTGCTCTTCAACTGGCGCCATCAATACCGGAAAGGTGGCCT
GCTGCCTTCCGGAAAAAATATGCCTGCACTGCTTCCCGTGACGTTAACGCCGGAGCCGGATAATAAAATCCCGGCTCCGG
CACAGGAACCAGAGCAGATAAATACACCGTCCGACAGTCTGTGCTGTGAGCTGGTTCTGCCGGCCGGAACTCTCAGGCTT
AAAGGTAAACTGACGCCGGCGTTATTACAGATACTTATCCGCGAAATAAAAGGGAGCAGCCACTGA

Protein sequence :
MAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
KGKLTPALLQILIREIKGSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-15 44
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 1e-15 44
unnamed AAL99257.1 unknown Not tested LEE Protein 2e-13 43
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 2e-13 43
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 3e-13 43
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-13 43
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-13 43
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 3e-13 43
unnamed AAC31492.1 L0013 Not tested LEE Protein 2e-13 43
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 3e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_2840 YP_404370.1 hypothetical protein VFG1697 Protein 3e-16 44
SDY_2840 YP_404370.1 hypothetical protein VFG1518 Protein 1e-13 43
SDY_2840 YP_404370.1 hypothetical protein VFG0791 Protein 9e-14 43
SDY_2840 YP_404370.1 hypothetical protein VFG1053 Protein 9e-14 43
SDY_2840 YP_404370.1 hypothetical protein VFG1708 Protein 9e-14 43