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Name : SDY_2537 (SDY_2537) Accession : YP_404097.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Virulence Product : fimbrial usher Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2333151 - 2334881 bp Length : 1731 bp Strand : - Note : Code: NU; COG: COG3188 DNA sequence : GTGGCAAAAAACCTGCAATGGATCCACGACGGCAAATGTTTGAAACCCGGCCAGCTGGAAGGCATTGATATTAAAGCTGA CCTGAGTCAGTCAGCGTTAGTCATTTCATTACCCCAGGCTTACCTTGAATATACCGACACCGACTGGGACCCACCTTCAC GCTGGGATGACGGTATTTCTGGTTTAATTGCTGACTACAGTATTACCGCTCAGACACGACATGAAGAAAATGGCGGGGAT GACAGCAATGAAATTAGCGGCAACGGCACTGTCGGGGTTAACCTCGGCGCATGGCGTCTGCGAGCCGACTGGCAGACTGA CTACCAGCACAGCAAAAGCAATGATGACGATGTTATCAACGGTGATGACACGCAAAAAAACTGGGAGTGGAGCCGCTACT ACGCTTGGCGGGCCTTACCGTCGCTAAAAGCCAAACTTGGCCTTGGCGAAGACTACCTTAATTCTGATATTTTCGACGGC TTTAACTACGTGGGTGGCAGTATCAGCACCGACGATCAAATGTTGCCGCCGAATCTGCGCGGCTATGCGCCGGATATCTC CGGCGTGGCGCACACCACCGCGAAAGTGACCGTCAGCCAGATGGGCCGCGTGATTTACGAAACGCAGGTTCCGGCGGGGC CGTTCCGCATCCAGGATCTTGGCGATTCCGTCTCTGGTACGCTGCATATCCGCATTGAAGAGCAGAACGGTCAGGTGCAG GAATATGACATCAACACCGCCTCGATGCCGTTCCTGACTCGCCCCGGCCAGGTGCGCTATAAGCTGATGATGGGCCGCCC GCAGGAGTGGGGGCATCATGTTGAAGGTGGTTTCTTCTCCGGCGGCGAAGCTTCATGGGGGATTGCCAACGGCTGGTCGC TGTACGGCGGGGCGCTGGCAGATGAACACTATCAGTCGGCGGCACTTGGCGTCGGTCGCGACCTGTCTGTCTTTGGCGCA GTCGCCTTTGATATCACCCACTCGCATACCCGCCTGGATAAAGAGACCGCCTACGGTAAAGGGTCACTGGACGGTAACTC GTTTCGCGTGAGCTATTCCAAAGACTTCGATGAACTGAACAGCCGCGTCACTTTTGCCGGATACCGCTTCTCGGAAGAGA ACTTCATGACCATGAGCGAGTATCTCGATGCCAGCGACAGCGAAATGGTGCGCACTGGCAACGACAAAGAGATGTACACC GCCACCTACAACCAGAACTTCAGGGATGCCGGTGTGTCTGTTTATCTAAACTATACCCGCCATACCTACTGGGATCGTGA CGAACAGACCAACTACAACGTCATGCTCTCGCACTACTTCAACCTGGGCAGTATCCGCAATATGAGCATTTCCATGACCG GATACCGCTACGAGTATGACAACCAGGCCGATAAAGGTGTGTACATATCGCTCAGCATGCCGTGGGGTGACAGCAGCACC ATCAGCTATAACGGCAACTACGGCAGCGGTTCGGACAGCAGCCAGGTGGGGTATTTCAGCCGTGTCGATGACGCAACCCA TTACCAGTTGAACGTAGGCACCAGCGACAAACACTCCAGCGTTGATGGCTATTACAGCCACGATGGATCGCTTGCGCAGG TGGATCTCAGCGCCAACTACCATGAAGGGCAGTACACCTCGGCAGGGATTTCACTCCAGGGCGGGCAACGCTCACCGCGC AGGGCGGCGCGCTCCACCGTACCCAGAATATGGGCGGCACGCGTCTGTTAA Protein sequence : MAKNLQWIHDGKCLKPGQLEGIDIKADLSQSALVISLPQAYLEYTDTDWDPPSRWDDGISGLIADYSITAQTRHEENGGD DSNEISGNGTVGVNLGAWRLRADWQTDYQHSKSNDDDVINGDDTQKNWEWSRYYAWRALPSLKAKLGLGEDYLNSDIFDG FNYVGGSISTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQ EYDINTASMPFLTRPGQVRYKLMMGRPQEWGHHVEGGFFSGGEASWGIANGWSLYGGALADEHYQSAALGVGRDLSVFGA VAFDITHSHTRLDKETAYGKGSLDGNSFRVSYSKDFDELNSRVTFAGYRFSEENFMTMSEYLDASDSEMVRTGNDKEMYT ATYNQNFRDAGVSVYLNYTRHTYWDRDEQTNYNVMLSHYFNLGSIRNMSISMTGYRYEYDNQADKGVYISLSMPWGDSST ISYNGNYGSGSDSSQVGYFSRVDDATHYQLNVGTSDKHSSVDGYYSHDGSLAQVDLSANYHEGQYTSAGISLQGGQRSPR RAARSTVPRIWAARVC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papCb | AAL67415.1 | truncated PapC | Virulence | PAI II CFT073 | Protein | 2e-96 | 49 |
