Gene Information

Name : yfaD (SDY_2439)
Accession : YP_404003.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 2242285 - 2243211 bp
Length : 927 bp
Strand : +
Note : Code: S; COG: COG5464; orf

DNA sequence :
ATGACCGAATCAACAACCTCCTCCCCGCATGATGCGGTGTTTAAAACCTTTATGTTCACACCCGAAACCGCACGGGATTT
TCTCGAAATACATTTACCAGAACCACTGCGCAAGCTTTGCAACCTGCAAACCTTACGCCTAGAGCCCACTAGTTTTATTG
AAAAAAGTTTACGCGCTTACTACTCGGATGTTTTGTGGTCCGTGGAAACCAGCGACGGTGACGGCTATATCTACTGCGTG
ATTGAACATCAAAGCTCTGCAGAAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCATCACCT
GGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCCTACCCGTACTCAC
TCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCAGTTGTACACCGAAGCTTTTCCGTTGGTGGATATTACC
ATCGTACCTGACGATGAGATCATGCAACATCGGCGTATAGCTCTGCTTGAACTGATTCAAAAGCATATTCGCAACCGCGA
TTTAATCGGTATGGTCGACAGGATCACCCCGCTTTTGGTTAGAGGCTTCACTAATGACAGCCAGCTACAAACACTGTTTA
ATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTCAGGAGATTGCCGAACGTTCACCACTACAAAAG
GAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGTTGGCAGGAAGGTAAATTAGAAGGTTT
GCAGGAAGGCATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGATCGTGACCTGGTGCTCG
CGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAA

Protein sequence :
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCV
IEHQSSAEKNMAFRLMRYATAAMQHHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
IVPDDEIMQHRRIALLELIQKHIRNRDLIGMVDRITPLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK
ERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSEADLAANNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 6e-84 56
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-87 56
pilW CAF28495.1 putative transposase Not tested YAPI Protein 5e-86 56
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 1e-83 52
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 2e-64 46