Gene Information

Name : ugd (SDY_2213)
Accession : YP_403789.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 2017207 - 2018373 bp
Length : 1167 bp
Strand : +
Note : Code: M; COG: COG1004

DNA sequence : 
ATGAAAATCACCATTTCCGGTACTGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGCGGC
ATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTT
TGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCC
ACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGAT
AAACCCTTATGTGGTTATGGTCATCAAATCAACGGTTCCCGTTGGTTTTACCGAAGCGATGCATAAGAAATATCGTACTG
AAAATATTATTTTTTCTCCGGAATTTCTCCGTGAAGGTAAAGCTCTTTACGATAATCTCCATCCTTCACGTATTGTCATC
GGTGAGCGTTCAGAACGCGCAGAACGTTTTGCGGCGTTATTACAGGAAGGCGCGATTAAGCAAAATATCCCACCCCTGTT
TACCGATTCAACCGAAGCAGAAGCGATTAAACTTTTCGCTAATACTTATCTGGCGATGCGCGTAGCATACTTTAATGAAC
TGGATAGCTATGCAGAAAGTTTAGGGCTGAATACTCGCCAGATTATCGAAGGCGTTTGTCTCGATCCGCGTATTGGCAAC
CATTACAACAACCCGTCGTTTGGCTATGGTGGTTATTGTCTGCCGAAAGATACCAAGCAGTTACTGGCGAACTACCAGTC
TGTGCCGAATAACCTGATTTCGGCAATTGTCGATGCAAACCGCACGCGTAAAGATTTTATTGCCGATGCCATTTTGTCAC
GCAAGCCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGATCAGATAACTTCCGTGCGTCTTCCATTCAGGGG
ATTATGAAACGTATCAAGGCGAAAGGCGTTGAAGTGATCATCTACGAACCGGTGATGAAAGAAGATTCATTCTTCAACTC
TCGGCTGGAACGTGATCTCGCCACTTTCAAACAACAAGCCGACGTCATTATTTCCAACCGTATGGCAGAAGAGCTTAAGG
ATGTGGCAGACAAAGTCTACACCCGCGATCTCTTTGGCAGTGACTAA

Protein sequence : 
MKITISGTGYVGLSNGLLIAQNHEVAALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA
TPTDYDPKTNYFNTSSVESVIKDVVEINPYVVMVIKSTVPVGFTEAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
GERSERAERFAALLQEGAIKQNIPPLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_403789.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 1e-101 54