|
Name : pspF (SDY_1941) Accession : YP_403537.2 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Virulence Product : phage shock protein operon transcriptional activator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 1763937 - 1764914 bp Length : 978 bp Strand : + Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor DNA sequence : ATGGCAGAATACAAAGATAATTTACTCGGTGAGGCAAACAGCTTTCTCGAAGTGCTGGAACAGGTTTCGCATCTCGCACC ACTGGACAAACCGGTGCTCATCATCGGCGAGCGCGGCACAGGTAAAGAACTGATCGCCAGCCGTCTGCATTATCTCTCCT CCCGTTGGCAAGGGCCGTTTATTTCCCTTAACTGCGCGGCGTTAAATGAAAATCTGCTGGATTCCGAACTGTTTGGTCAC GAAGCTGGCGCGTTTACCGGTGCGCAAAAACGTCATCCAGGGAGATTTGAACGTGCCGACGGCGGTACGCTATTTCTTGA TGAACTCGCTACGGCACCGATGATGGTGCAGGAAAAATTATTGCGCGTGATTGAGTACGGTGAACTGGAGCGCGTAGGCG GTAGTCAGCCATTGCAGGTGAATGTGCGGCTGGTATGTGCAACGAATGCCGATCTCCCGGCGATGGTCAATGAAGGTACT TTTCGCGCTGACCTGCTCGACCGGCTGGCTTTCGATGTAGTGCAACTGCCGCCCCTGCGCGAGCGCGAAAGCGACATTAT GCTGATGGCAGAACACTTTTCCATTCAGATGTGTCGGGAAATCAAGCTGCCTCTGTTCCCGGGTTTTACCGAGCGCGCCA GAGAAACATTGCTGAATTATCGTTGGCCAGGAAATATTCGTGAATTGAAAAACGTGGTGGAACGTTCAGTGTATCGCCAC GGCACCAGCGATTATCCGCTTGATGACATCATTATTGATCCCTTTAAACGGCGTCCGCCTGAAGAAGCCAACGCCGTTTC AGAAAACACCTCGCTTCCGACGCTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCAGGAAAAAGAGTTGCTGCAACTCA GTTTGCAACAAGGGAAATATAACCAGAAGCACGCAGCTGAATTGCTGGGCTTAACCTATCATCAGTTCCGCGCGTTGTTG AAAAAGCACCAGATTTAG Protein sequence : MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGT FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFSIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRH GTSDYPLDDIIIDPFKRRPPEEANAVSENTSLPTLPLDLREFQMQQEKELLQLSLQQGKYNQKHAAELLGLTYHQFRALL KKHQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 3e-35 | 41 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 3e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pspF | YP_403537.2 | phage shock protein operon transcriptional activator | VFG1214 | Protein | 6e-42 | 42 |
