Gene Information

Name : SDY_1930 (SDY_1930)
Accession : YP_403527.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : IS911 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1758417 - 1758938 bp
Length : 522 bp
Strand : -
Note : Code: L; COG: COG2801

DNA sequence : 
GTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGT
TCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGG
AAATGGCATGGGAAACCCGTGGTAAGTCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAG
TTCCGGCAGTTATTGTGGCGATACCAGATCAGGCAGAGTATGAGCCGGCGCGGAAATTGCTGGGATAACAGCCCAATGGA
ACGCTTCTTTAGAAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAA
CGGATTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAAT
CGATACTGGAAAAACTCTAACTCGGTGGCCAGTTTTTGTTGA

Protein sequence : 
MTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKSGGVMFHSDQGSHYTSRQ
FRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEN
RYWKNSNSVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-74 90
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-74 90
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 9e-52 63
unnamed CAI43898.1 putative transposase Not tested LEE Protein 9e-52 63
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-52 62
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-52 62
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-52 62
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-52 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_1930 YP_403527.1 IS911 ORF2 VFG1484 Protein 2e-74 90
SDY_1930 YP_403527.1 IS911 ORF2 VFG0785 Protein 6e-53 62