|
Name : SDY_1894 (SDY_1894) Accession : YP_403491.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Unknown Product : IS600 ORF2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1727951 - 1728664 bp Length : 714 bp Strand : - Note : Code: L; COG: COG2801 DNA sequence : GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGG TCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAACGCAAGTTCAGAGCGACTACGAACT CGAACCATAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTACAGCACCAAATCAGGTATGGGGTGGC GGACCTGACGTATGTTGCCACACAGGAGGGATGGTGTACCTCGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGG CTACGCCATGGGAGAGTGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTG CCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTTTGGTCTG AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAG CCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGAGAATACATTGAGATTTTCTACAATCGTC AGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTGA Protein sequence : MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWGG GPDVCCHTGGMVYLAGIKDVYTCEIVGYAMGECMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGL KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 9e-88 | 94 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 8e-88 | 94 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-87 | 94 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 8e-88 | 94 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 8e-88 | 94 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 1e-87 | 93 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-87 | 93 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-87 | 93 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 1e-85 | 92 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 5e-35 | 43 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 5e-35 | 43 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 5e-35 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SDY_1894 | YP_403491.1 | IS600 ORF2 | VFG1706 | Protein | 4e-88 | 94 |
