Gene Information

Name : SDY_1768 (SDY_1768)
Accession : YP_403374.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1607962 - 1608264 bp
Length : 303 bp
Strand : -
Note : Code: L; COG: COG2963

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCCCTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGTGTAAGGCGTTAAATGAAGCTTGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTTGCTGAAAAATACGCGTTAA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGPLGQWVTAARKGLGTPGSRTVAELESEILQLCKALNEACLE
RDILKKATAYFAQELLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-37 96
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-37 96
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-37 95
unnamed AAF09021.1 unknown Not tested SHI-O Protein 5e-37 95
unnamed AAF09029.1 unknown Not tested SHI-O Protein 5e-37 95
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-37 95
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 5e-30 95
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 5e-30 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDY_1768 YP_403374.1 IS600 ORF1 VFG1707 Protein 1e-37 95