|
Name : insB (SDY_1560) Accession : YP_403187.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Unknown Product : IS1 ORF2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 1427626 - 1428003 bp Length : 378 bp Strand : + Note : Code: L; COG: COG1662 DNA sequence : ATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGAC GGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCCCCCTTTGACGTGG TGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCAATATACG CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATC GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA Protein sequence : MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKQYT QRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 2e-55 | 99 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 2e-55 | 99 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 2e-55 | 99 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 9e-54 | 95 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 3e-53 | 93 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 3e-53 | 93 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 3e-52 | 92 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 1e-52 | 92 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 2e-52 | 92 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 8e-51 | 90 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| insB | YP_403187.1 | IS1 ORF2 | VFG0612 | Protein | 2e-51 | 90 |
