Gene Information

Name : iroB (SDY_1026)
Accession : YP_402682.1
Strain : Shigella dysenteriae Sd197
Genome accession: NC_007606
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1819
EC number : -
Position : 972380 - 973495 bp
Length : 1116 bp
Strand : -
Note : Code: GC; COG: COG1819

DNA sequence :
ATGCGTATTTTGTTTGTAGGCCCGCCTCTCTATGGGCTGTTGTATCCTGTGCTGTCCCTGGCGCAGGCATTTCGCGTTAA
CGGTCATGAAGTACTGATCGCCAGCGGAGGACAATTCGCACAAAAAGCGGCAGAGGCCGGGTTGGTGGTGTTTGACGCCG
CACCCGGTCTGGATTCCGAAGCTGGTTACCGCCACCATGAGGCACAGCGGAAAAAAAGTAATATCGGAACCCAAATGGGC
AACTTCTCATTCTTCAGCGAAGAAATGGCCGACCATCTGGTGGAGTTTGCCGGACACTGGCGGCCTGACCTCATCATCTA
CCCTCCGCTCGGAGTCATCGGGCCGCTGATTGCCGCCAAATATGATATACCGGTCGTGATGCAAACCGTAGGCTTCGGCC
ATACCCCCTGGCATATCAGGGGTGTAACGCGTTCGCTCACGGACGCCTATCGTCGCCACAATGTGGGGGCCACACCACGT
GATATGGCCTGGATCGACGTAACACCGCCGAGTATGAGCATTCTGGAAAACGACGGTGAACCCATTATTCCGATGCAGTA
CGTCCCGTATAACGGTGGCGCGGTGTGGGAACCATGGTGGGAGAGAAGGCCCGAGCGTAAACGTCTGCTGGTGAGTCTCG
GCACTGTCAAACCGATGGTTGACGGCCTTGATCTAATCGCCTGGGTTATGGATTCTGCCAGTGAGGTCGATGCCGAGATC
ATCCTGCATATTTCAGCCAATGCGCGGTCCGATTTGCGCTCGCTGCCATCAAATGTTCGCCTGGTTGACTGGATACCCAT
GGGTGTCTTCCTCAACGGCGCAGATGGTTTCATTCATCATGGCGGAGCAGGCAATACCCTGACAGCGCTACACGCTGGTA
TTCCACAAATCGTCTTCGGCCAGGGAGCCGATCGCCCGGTAAATGCCCGCGTTGTTGCCGAACGCGGCTGCGGGATTATC
CCCGGCAACGTCGGCCTGTCGAGTAACATGATCAATGCTTTCCTCAACAATCGCTCACTTCGCAAAGCCTCTGAAGAGGT
AGCAGCGGAAATGGCGGCGCAACCCTGCCCAGGTGAAGTGGCGAAAAGCCTGATCACAATGGTACAGAAAGGGTAG

Protein sequence :
MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGQFAQKAAEAGLVVFDAAPGLDSEAGYRHHEAQRKKSNIGTQMG
NFSFFSEEMADHLVEFAGHWRPDLIIYPPLGVIGPLIAAKYDIPVVMQTVGFGHTPWHIRGVTRSLTDAYRRHNVGATPR
DMAWIDVTPPSMSILENDGEPIIPMQYVPYNGGAVWEPWWERRPERKRLLVSLGTVKPMVDGLDLIAWVMDSASEVDAEI
ILHISANARSDLRSLPSNVRLVDWIPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARVVAERGCGII
PGNVGLSSNMINAFLNNRSLRKASEEVAAEMAAQPCPGEVAKSLITMVQKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroB CAD66179.1 IroB protein Virulence PAI III 536 Protein 9e-158 99
Z1190 NP_286725.1 glucosyltransferase Not tested TAI Protein 4e-117 71
join NP_287133.1 glycosyl transferase Not tested TAI Protein 3e-116 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iroB YP_402682.1 glycosyl transferase VFG1654 Protein 5e-158 99