Gene Information

Name : Synpcc7942_0704 (Synpcc7942_0704)
Accession : YP_399723.1
Strain : Synechococcus elongatus PCC 7942
Genome accession: NC_007604
Putative virulence/resistance : Resistance
Product : chloramphenicol O-acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 695313 - 695948 bp
Length : 636 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTATCCCAGTCCTCACAATAAGCATCCTTTGCCAGATTTTCTGCAGGTCTGCTTCATCAAGAATACGGTGAAAAA
TCCCAATATTCTGATTGGGGATTACACCTATTACGATGATCCTGAAGATTCTGAGAACTTTGAGCGTAATGTGCTTTATC
ACTTTCCCTTTGTCGGCGATAAGCTGATCATCGGTAAGTTTTGTGCGATCGCTCGAGGTGTGAAATTCATCATGAATGGT
GCGGCTCACAAGATGTCGGGCTTTTCAACCTATCCCTTTGAGATCTTTGGGCCGAGCTGGGATCGCGTTATGCCTCAGCC
GGGCGACTATCCTTATAAAGGTGATACCGTCATTGGTAATGATGTTTGGATTGGTTATGAAACGCTAATTTTGCCAGGTG
TGAAAATCGGTCACGGTGCGATTATCGGAGCGCGATCGCTCGTTACTAAAGATGTGCCACCCTATGGGATTGTTGGGGGA
AATCCCGCAGATGTTTTGAAGATGCGTTTTTCAGAGCCTGTCATCGAAGCCTTGTTAGAAATTGCTTGGTGGGATTGGCC
AGTTGAGAAAATTACTGAGAATCTAGAAGCGATCGTGGGTGCAGATTTGGATGTTCTGAAAAATGTCAGCAGTTGA

Protein sequence : 
MTYPSPHNKHPLPDFLQVCFIKNTVKNPNILIGDYTYYDDPEDSENFERNVLYHFPFVGDKLIIGKFCAIARGVKFIMNG
AAHKMSGFSTYPFEIFGPSWDRVMPQPGDYPYKGDTVIGNDVWIGYETLILPGVKIGHGAIIGARSLVTKDVPPYGIVGG
NPADVLKMRFSEPVIEALLEIAWWDWPVEKITENLEAIVGADLDVLKNVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-31 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-31 45
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-31 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase AM180355.1.gene2499. Protein 4e-46 50
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase AF322577.2.gene4.p01 Protein 7e-32 45
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase AY740681.1.gene5.p01 Protein 7e-32 45
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase AY123251.gene2.p01 Protein 2e-31 45
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase JF268688.1.gene6.p01 Protein 3e-31 44
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase NC_002516.2.878374.p Protein 2e-31 44
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase NC_011595.7057349.p0 Protein 7e-18 41
Synpcc7942_0704 YP_399723.1 chloramphenicol O-acetyltransferase NC_010410.6000796.p0 Protein 7e-18 41