Gene Information

Name : PMT9312_0880 (PMT9312_0880)
Accession : YP_397376.1
Strain : Prochlorococcus marinus MIT 9312
Genome accession: NC_007577
Putative virulence/resistance : Virulence
Product : glutamine synthetase, glutamate--ammonia ligase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 811714 - 813135 bp
Length : 1422 bp
Strand : -
Note : -

DNA sequence :
ATGTCTAAATCTCCTCAAGATGTTTTAAGTCAAATTAAAGACGAAGGAATTGAACTCATCGATTTAAAATTCACAGATAT
TCATGGAAAATGGCAACATTTAACACTTACATCAGACATGATAGAAGAGGATTCTTTTACTGAAGGCTTAGCGTTTGATG
GGTCATCAATAAGAGGTTGGAAAGCAATTAATGCATCTGATATGTCAATGGTGCCTGATTCAAGTACAGCTTGGATCGAT
CCTTTTTATAAACATAAAACATTAAGTATGATTTGCTCTATTCAAGAGCCAAGAAGCGGTGAGCCTTATGATAGATGTCC
AAGGGCTTTAGCTCAAAAGGCATTAAAATATTTAGACTCTACTGGCATAGCAGATACTGCATTTTTTGGACCTGAGCCAG
AATTCTTTTTATTTGATGATGTTAGATATGACTCTAAAGAAGGAGGTTGTTTTTATAGTGTAGATACTATTGAAGCACCA
TGGAATACAGGGAGAATAGAAGAAGGTGGGAACTTAGGATACAAAATACAATATAAAGAAGGATATTTTCCAGTAGCTCC
AAATGATACTGCGCAAGATATCAGATCTGAGATGCTTCTTCTTATGGGTGAATTAGGTATCCCTACAGAAAAACATCACC
ATGAAGTTGCTGGTGCCGGCCAACACGAGCTTGGAATGAAATTTGATTCTTTAATAAAAGCTGCTGATAACGTTATGACG
TATAAATACGTGGTTAGAAACGTAGCTAAAAAATATGGGAAAACTGCAACATTTATGCCTAAGCCTGTATTTAACGATAA
TGGGACTGGAATGCATGTTCACCAAAGTTTATGGAAGAGTGGACAGCCACTATTCTTTGGTGAAAGTGCCTATGCAAATT
TATCCCAAACAGCTAGATGGTATATCGGAGGAATACTTAAACATGCCCCTTCATTCCTAGCGTTTACTAATCCAACAACA
AATAGTTATAAAAGATTGGTTCCAGGATTTGAAGCACCTGTAAATCTAGTTTATTCTGAGGGTAATAGATCGGCTGCAGT
AAGAATACCTTTAACTGGTCCAAGTCCAAAAGCTAAAAGATTAGAATTTAGATCAGGTGACGCACTTGCTAACCCATATT
TAGCTTTCTCTGTAATGATGCTCGCTGGTATTGATGGGATCAAAAATCAAATAGATCCTGGTGATGGTGTAGATGTTGAT
TTATTCGAACTTCCTGCAGAAGAACTTGCAAAAATTGATACAGTACCTTCATCTCTTAATGATTCACTTAATGCACTCAA
AGCAGACAAGGATTATCTATTAGCTGGTGGAGTATTTACAGAAGATTTTATTGATAACTTTATCGATATAAAATACGAAG
AGGTACAACAATTAAGACAGAGGCCTCATCCACATGAATTCTTTATGTATTACGATGCATAA

Protein sequence :
MSKSPQDVLSQIKDEGIELIDLKFTDIHGKWQHLTLTSDMIEEDSFTEGLAFDGSSIRGWKAINASDMSMVPDSSTAWID
PFYKHKTLSMICSIQEPRSGEPYDRCPRALAQKALKYLDSTGIADTAFFGPEPEFFLFDDVRYDSKEGGCFYSVDTIEAP
WNTGRIEEGGNLGYKIQYKEGYFPVAPNDTAQDIRSEMLLLMGELGIPTEKHHHEVAGAGQHELGMKFDSLIKAADNVMT
YKYVVRNVAKKYGKTATFMPKPVFNDNGTGMHVHQSLWKSGQPLFFGESAYANLSQTARWYIGGILKHAPSFLAFTNPTT
NSYKRLVPGFEAPVNLVYSEGNRSAAVRIPLTGPSPKAKRLEFRSGDALANPYLAFSVMMLAGIDGIKNQIDPGDGVDVD
LFELPAEELAKIDTVPSSLNDSLNALKADKDYLLAGGVFTEDFIDNFIDIKYEEVQQLRQRPHPHEFFMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-98 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0880 YP_397376.1 glutamine synthetase, glutamate--ammonia ligase VFG1399 Protein 2e-123 56