Gene Information

Name : PMT9312_0717 (PMT9312_0717)
Accession : YP_397213.1
Strain : Prochlorococcus marinus MIT 9312
Genome accession: NC_007577
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 666279 - 667007 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTATTAAAGATCATAAAAGTTTGCAAGACTCAAGAATTCTTCTTGTAGAGGATGATAAGAGTATTAGGCTTACTGT
CAGTGAAACCTTGATCAGCGAAGGTTTCAAAGTATCAAGTTTCAAAGACGGTTTAAGTGCCTTAGATTTTATTAATAATG
ATATTAAAAAAGATGTTGACCTAATAATTCTAGATTTAATGTTGCCAGGACTAAATGGATTAGAGTTATGTAGAAAAATA
AGAAATGATGAAGACTATACACCCATACTAATTTTGAGTGCTAAAGATAATGAATCAGACAGGGTTCTTGGATTAGAGGT
TGGTGCAGATGATTATTTAACAAAACCTTTTGGTTTAAATGAATTAATTGCTAGATCTAGAGCATTAATAAGAAGATCTA
AACGTAATAAAAAATATATAGAAAACTCAAAAACTGTTCTCGAGTTTAATCATATAAAAATGTTCTTGGAAGAATGTAGG
GTAACTTCTTTTGATAGAGAAATAACATTATCTCCAAAAGAATTTAAATTATTAGAGTTATTTATGAAAAATCCAAAAAG
AGTATGGTCAAGGGATTTAATACTTGAAAAAATATGGGAAATTGACTTTATTGGTGATACTAAAACTGTAGATGTTCATG
TTAGGTGGCTCAGAGAGAAATTAGAAGAAGATCCCTCAGCTCCAAAGTTTCTTAAAACTGTAAGAGGTTTTGGATATAAG
TTTGGATGA

Protein sequence : 
MAIKDHKSLQDSRILLVEDDKSIRLTVSETLISEGFKVSSFKDGLSALDFINNDIKKDVDLIILDLMLPGLNGLELCRKI
RNDEDYTPILILSAKDNESDRVLGLEVGADDYLTKPFGLNELIARSRALIRRSKRNKKYIENSKTVLEFNHIKMFLEECR
VTSFDREITLSPKEFKLLELFMKNPKRVWSRDLILEKIWEIDFIGDTKTVDVHVRWLREKLEEDPSAPKFLKTVRGFGYK
FG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-29 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0717 YP_397213.1 two component transcriptional regulator AE000516.2.gene3505. Protein 1e-28 42
PMT9312_0717 YP_397213.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-30 41
PMT9312_0717 YP_397213.1 two component transcriptional regulator AE016830.1.gene1681. Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0717 YP_397213.1 two component transcriptional regulator VFG1563 Protein 2e-29 42
PMT9312_0717 YP_397213.1 two component transcriptional regulator VFG1702 Protein 4e-29 42
PMT9312_0717 YP_397213.1 two component transcriptional regulator VFG1390 Protein 4e-36 41