Gene Information

Name : PMT9312_0603 (PMT9312_0603)
Accession : YP_397100.1
Strain : Prochlorococcus marinus MIT 9312
Genome accession: NC_007577
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 567524 - 568399 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGTTCTGTTTATTCTCTAGTATAAATTCATTCTTAACAGATCCTTTAACTCATGATTTTATGAGAAAAGCTTTATT
TATGAGCTCTTTAGTTGCTGCTGTTTGTGGTTTTTTATCTAGTTATTTAACTCTCAAAGGTTGGGCTTTAATGGGGGATG
CCGTATCACATTCAGTAATGCCTGGAGTTGTTGTGGCTTATGCTTTGGGATTACCATTCTCATTGGGTGCATTTATATTC
GGAGTAGGTTCTGTAGCACTTATAGGATTTGTTAAACAAAAATCGAGAGTTAAGGAAGATACTGTTATTGGGTTAGTCTT
TACAGGCTTTTTTGCTCTTGGAATAGTTTTGGTTTCTAAGATTAAAAGTAATATTGATCTCCACTCTATTCTTTTTGGAA
GTCCATTAGGTATATCACTATCTGATGTGAAGCAAACGGTATTGATTTCTTTGTTGGTAGTAATACTTTTATCAGTTTTC
AGGAAAGATTTAATGCTTTACTGTTTTGATCCTAGACACGCAAAAACTGTAGGAATTAATGTCCATTTCCTGCATTATTT
GCTTCTTACCTGCTTATCTTTAGCGGCCGTTGTTGGTTTGCAGACGGTTGGAATAATATTGGTAGTTGCAATGTTGATAA
CTCCAGGGGCTACGGCATACTTACTTACTGATCAATTTGATAATATGACCATTATTTCAGTAATAAGCGCCATTATCTCT
AGTGTGATAGGTATCTATTGTAGTTTTTGGTTCGATCTTGAAACCGGAGGTTCTATAGTCTTAGCCCAAACTTTTATATT
TTTATTTGCTTTTTTATTCGCTCCGAGATATGGAATATTCAAGTTTAAAAAATTATTTGCTGGGTCTAAACGATAA

Protein sequence : 
MEFCLFSSINSFLTDPLTHDFMRKALFMSSLVAAVCGFLSSYLTLKGWALMGDAVSHSVMPGVVVAYALGLPFSLGAFIF
GVGSVALIGFVKQKSRVKEDTVIGLVFTGFFALGIVLVSKIKSNIDLHSILFGSPLGISLSDVKQTVLISLLVVILLSVF
RKDLMLYCFDPRHAKTVGINVHFLHYLLLTCLSLAAVVGLQTVGIILVVAMLITPGATAYLLTDQFDNMTIISVISAIIS
SVIGIYCSFWFDLETGGSIVLAQTFIFLFAFLFAPRYGIFKFKKLFAGSKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 5e-44 45
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-44 45
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-44 45
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-44 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-44 45
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-47 43
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-47 43
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-47 43
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-47 43
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-47 43
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 9e-43 41
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 7e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0603 YP_397100.1 ABC transporter BAC0441 Protein 2e-45 47
PMT9312_0603 YP_397100.1 ABC transporter BAC0442 Protein 7e-52 46
PMT9312_0603 YP_397100.1 ABC transporter BAC0352 Protein 2e-44 45
PMT9312_0603 YP_397100.1 ABC transporter BAC0351 Protein 2e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0603 YP_397100.1 ABC transporter VFG0528 Protein 2e-44 45
PMT9312_0603 YP_397100.1 ABC transporter VFG0527 Protein 2e-47 43