Gene Information

Name : PMT9312_0602 (PMT9312_0602)
Accession : YP_397099.1
Strain : Prochlorococcus marinus MIT 9312
Genome accession: NC_007577
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 566747 - 567511 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAACTCTAATTATCAAAACTATAGGATTGATGCAGAAAATATATGCGTAGACTACAACGGTAAAGTTGCATTATA
TGATGCCAACTTAAGATTAAAACCTGGTCAAATTTGTGGATTGGTAGGAATGAATGGTGCAGGGAAAACAACTTTTTTTA
ATGCATTGACTGGCTTCGTTAACATTTCTAAGGGGAAAATAAGAATTAACGGAGAGTCTTTAAGGTCTGCTCAAAAAGAT
CAGACAATCGCTTATGTTCCTCAAAGTGAAGGTATTGATAGTCAATTCCCTGTAAATGTTTGGGATGTTGTAATGATGGG
GAGATATGGGTCGATGAATGTTCTCAGGTGTCCAAGAGAATCTGATGTTCAGGCTGTTAAAGATGCTATTGAGAGGGTTG
ACCTGACCGATTTTTTATCTACACCAATTGGTAATTTGTCTGGAGGTCAAAGGAAAAGAACTTTTTTAGCCAGAGCAATT
GCACAAAGAGCCTCAATATTATTGCTGGATGAACCCTTTACGGGAGTTGATATAAGAACTGAGAAACTAATTTCGGAATT
ATTTATTCAGTTTAAAAATGAGGGTAAAACAATTTTATTATCAACTCATGATATGATTCATGTTCGCGAATTTTGTGATT
TGGTACTTTTAATAAACAAAACAGTAGTTGCATATGGGGAGACCTCTGAAGTCTTTACTCCTGAAAATATAACAAGTACC
TTTGGTGGGATCTCTCCTGACGTTTTGTTTGGCCCTGAGTCATAA

Protein sequence : 
MENSNYQNYRIDAENICVDYNGKVALYDANLRLKPGQICGLVGMNGAGKTTFFNALTGFVNISKGKIRINGESLRSAQKD
QTIAYVPQSEGIDSQFPVNVWDVVMMGRYGSMNVLRCPRESDVQAVKDAIERVDLTDFLSTPIGNLSGGQRKRTFLARAI
AQRASILLLDEPFTGVDIRTEKLISELFIQFKNEGKTILLSTHDMIHVREFCDLVLLINKTVVAYGETSEVFTPENITST
FGGISPDVLFGPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-51 50
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-51 50
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-51 50
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-51 50
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-51 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0602 YP_397099.1 ABC transporter ATP-binding protein BAC0440 Protein 4e-56 52
PMT9312_0602 YP_397099.1 ABC transporter ATP-binding protein BAC0350 Protein 2e-51 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0602 YP_397099.1 ABC transporter ATP-binding protein VFG0526 Protein 2e-51 50