Gene Information

Name : PMT9312_0601 (PMT9312_0601)
Accession : YP_397098.1
Strain : Prochlorococcus marinus MIT 9312
Genome accession: NC_007577
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 565835 - 566743 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGCATAAAAAGTTTTTACTTTTAATTTTTGTATATTTGATATGTCTTTTTTCAACTACCTCATGTAACAGAATCACAAC
TAAAAATGAAACTAAAAAAGAGGTGGTTTTAGCAAGCTTTACCGTTTTGGCAGATATAATCCAAAATATTGTTAAAAATG
ATGACTTCGTGGTTAGATCAATCACTAAACCTGGGATAGAAGTTCATGGTTATAAACCAACTCCAAGTGACCTAATAAAT
GCCTCAGAAGCATTTGTGTTTGTGGATAATGGATTTGGATTTGAAATATGGTCAGAAAAATTTGTTTCTAATTTGAAAGT
TCAAAGAATAACAATTGGAGATGATTTGGAACCCATATTTATAAGTGAAGATTCTTACAAAGGTAAACCAAATCCCCATG
CTTGGATTTCCCCAAAAAGAGGAATTCTTTATGTAGATATTATCGTGGAATCCTTATCAGAATTGAGGCCCACAAGAAGA
GAATTATTCGAAAAGAATGGAGAAACTTATAAAAATAAACTCTCTAAAATTCATAAAGATTTTTCACTTTTTATTAATAA
CTTAGAAAAAGATAAAAGGTATCTAGTAAGTTGTGAGGGTGCATTTTCTTATCTTGCTAATGATTATGGGTTAAATGAAG
TTTACTTATGGCCCGTTAATGCCGAGAGTCAAATCACTCCAAAAAGGATGGCAAGAACAATATCCTTAGTTAAGAAAAAA
AATGTCCCAGCTGTATTTTGTGAAAGTACTGTAAGCAATGAATCCCAAATGGTTGTTGTAAATGAAACTGGAACTAAATT
TGGAGGAAATCTTTATGTTGATTCGTTGTCAGGTGATAATGGCCCAGCTAATTCTTACTTAGGAATGCTGAAACATAATT
TGGAAATTATTAAAAGAGGTCTTGAATAA

Protein sequence : 
MHKKFLLLIFVYLICLFSTTSCNRITTKNETKKEVVLASFTVLADIIQNIVKNDDFVVRSITKPGIEVHGYKPTPSDLIN
ASEAFVFVDNGFGFEIWSEKFVSNLKVQRITIGDDLEPIFISEDSYKGKPNPHAWISPKRGILYVDIIVESLSELRPTRR
ELFEKNGETYKNKLSKIHKDFSLFINNLEKDKRYLVSCEGAFSYLANDYGLNEVYLWPVNAESQITPKRMARTISLVKKK
NVPAVFCESTVSNESQMVVVNETGTKFGGNLYVDSLSGDNGPANSYLGMLKHNLEIIKRGLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 7e-54 42
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 7e-54 42
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-54 42
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-54 42
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 7e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0601 YP_397098.1 ABC transporter substrate-binding protein BAC0349 Protein 3e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT9312_0601 YP_397098.1 ABC transporter substrate-binding protein VFG0525 Protein 3e-54 42