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Name : PMT9312_1289 (PMT9312_1289) Accession : YP_397784.2 Strain : Prochlorococcus marinus MIT 9312 Genome accession: NC_007577 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1195448 - 1196725 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGTTAGACCAAAAATTAATAAGAGAAAATCCAACGTCTGTTGAAGAGAATTTATCCTTAAGAGGAAAAGTTTACAAAAT ATCCCACATTCACGAATTAACAGTTAAAAAAAAAGAAATTGATATAGAAATATCGAGCCTTCAATCCGAGAGTAAAAAAT TAAGCAAATTAATCGGTCAAGTAATTGCAAAATCACAAAACACTAATTCACAAGAACTAAATGATTTAAAAAAAAGAGGA AACGAATACAGAATCAAAATTTCTGAACTTGAAGAGAAACAAAGAATATTAGATAAACAAGTAGATGATGAGATTTATAA TTTGCCAAATTTCTCTAGCAAAGAAGCACCTATTGGGAAAGATGAAAGTGATAATGTACAAATAAAAACTTGGGGAGACA CTCTTATAAGGGAGAATATTAAATCACACTGGGAAATAGGAGAAAGTCTTAATATTTTTGACTCCGTAAAATCAACAAAA ATATCAAAAAGTCGTTTTATCACTCTTATTGGTAATGGCGCCAAATTAGAGAGGGCATTGATTAATTTCATGCTCGATAT TCATACTAAAAATGGTTATTTAGAGTTAATGCCTCCAGCTTTAGTAAATTCAGAAAGTCTTAGGGGATCTGGACAATTAC CTAAATTTTCAAATGAAAGTTTTAAATGTTCTAATGATGATTTATGGCTTTCTCCAACAGCCGAAGTTCCACTCACTGCT TTTCATAGAAATGAAATTATTGATCCTAAGCAGTTACCTATTAAGTATGTTGCATATAGTCCATGTTTCAGAAGAGAAGC TGGTAGTTATGGTAGGGATACTAAGGGCTTAATACGACTTCATCAATTTAATAAGGTTGAGCTTTATTGGTTTTGTGATC CAAGTAAATCTTTAGAAGCTCATAAAAAGATTACTTCTGATGCAGAAAGCATTTTAAAAAAGCTCAATTTACCATACAGA TTAGTAGATATTTGTACTGGAGACTTAGGCTTTTCTTCTAGTAGAACTTTTGATCTTGAAGTCTGGCTGCCCAGTAGTAA ATGTTATAGAGAAATTTCAAGTTGCAGTAATTGTCTAGACTTTCAAGCACGTAGATCATCAATAAGATCAAAAATTAATA AAAAAAATACATATTTGCACACTTTAAATGGTAGTGGGCTTGCTATTGGAAGAACAATGGCCGCGATTCTTGAGAATGGC CAACAAAAAGATGGTAGCGTTAAAATTCCAGATGCTCTTGTTCCATATTTTGGATCAAATTATTTAAAAACTGCTTAA Protein sequence : MLDQKLIRENPTSVEENLSLRGKVYKISHIHELTVKKKEIDIEISSLQSESKKLSKLIGQVIAKSQNTNSQELNDLKKRG NEYRIKISELEEKQRILDKQVDDEIYNLPNFSSKEAPIGKDESDNVQIKTWGDTLIRENIKSHWEIGESLNIFDSVKSTK ISKSRFITLIGNGAKLERALINFMLDIHTKNGYLELMPPALVNSESLRGSGQLPKFSNESFKCSNDDLWLSPTAEVPLTA FHRNEIIDPKQLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSLEAHKKITSDAESILKKLNLPYR LVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNCLDFQARRSSIRSKINKKNTYLHTLNGSGLAIGRTMAAILENG QQKDGSVKIPDALVPYFGSNYLKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-83 | 47 |
