|
Name : PMT9312_1099 (PMT9312_1099) Accession : YP_397594.1 Strain : Prochlorococcus marinus MIT 9312 Genome accession: NC_007577 Putative virulence/resistance : Virulence Product : Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1011296 - 1013824 bp Length : 2529 bp Strand : - Note : - DNA sequence : ATGTTTGAAAGGTTTACAGAAAAGGCTATAAAAGTCATTATGCTTGCCCAAGAGGAAGCGAGAAGACTTGGTCATAATTT CGTTGGAACAGAACAGATTTTATTAGGTCTAATTGGTGAGGGTACAGGAGTTGCGGCAAAGGTTCTTAAATCACTAGGTG TCAATTTAAAAGATTCAAGAATAGAAGTAGAAAAAATAATTGGTAGAGGTTCAGGATTTGTAGCTGTAGAAATACCCTTT ACCCCTAGGGCGAAAAGAGTCTTAGAATTATCTCTTGAAGAAGCGCGTCAATTGGGTCATAATTATATAGGGACTGAACA TCTTTTACTGGGTTTAATAAGAGAAGGTGAGGGCGTAGCTGCAAGGGTGCTAGAAAATCTAAGTATTGATCTCACTAAAG TGAGAACTCAAGTCATAAGGATGCTTGGTGAAACAGCTGAAGTCGGAAGTGGAGCTAATTCAAGCAAGGGTAATTTAAAA ACGGCAACTCTTGATGAATTTGGAACAAATTTAACAAAGCTTGCTAGTGAATCAAAACTCGATCCAGTAGTTGGCCGTTA TGCAGAAATAGATCGCGTAGTCCAAATATTAGGTAGAAGGACTAAAAATAATCCCGTTCTTATCGGTGAACCTGGCGTAG GTAAAACTGCTATTGCAGAGGGTTTAGCTCAAAGAATACAGCTAGGAGATATTCCTGACATACTTGAAGATAAAAGAGTT TTAACTCTTGATATAGGACTCTTGGTCGCTGGAACAAAATATAGAGGAGAATTTGAGGAAAGATTGAAAAAGATAATGGA AGAAATTAAATCTGCCGGTAATGTAATACTTGTTATAGATGAAGTGCATACTTTAATTGGTGCTGGAGCTGCTGAAGGTG CTATAGATGCAGCAAATATTCTGAAGCCAGCCTTAGCCCGAGGAGAACTCCAATGTATTGGAGCAACAACACTCGATGAA TATAGAAAACATATTGAAAGAGATGCCGCTCTAGAGAGAAGATTCCAACCTGTAATGGTTGGTGAACCATCTATTGAAGA TACGATCGAAATCTTAAAAGGTCTTCGAGAACGTTATGAACAACATCATCGCTTAAAAATTACTGATGAAGCTTTAGAAG CTGCAGCGCACCTAGGAGATCGATATATATCCGATAGGTTCTTGCCCGATAAAGCTATAGACCTTATCGATGAGGCAGGA AGTAGAGTACGTTTAATAAACTCTAAACTTCCACCTGAAGCAAAACAAATAGACAAAGAACTGAGACAAATTCAAAAACA AAAGGAAGAATCTGTCAGAGATCAAAATTTTGATCAAGCTGGCCAATTAAGAGAAAAGGAGATCGAATTATCTGCAAAAA TTAAAGAGGTTCTTGAAAATAAAAAAGAATCTACAACTGAGGATGAATCTAGTGTTGATACAAACTCAGTAAAAAATGAT TCAAAACTTTTACAAAACCCTATGGTTAATGAAGAGGACGTAGCACATATTGTTGCATCTTGGACTGGTGTACCTGTTCA AAAATTAACTGAAACTGAATCAGTCAAGCTACTCAATATGGAGGAAACACTTCACCAAAGGCTAATTGGACAAGATGAAG CTGTAAAAGCTGTTTCTAGAGCTATCAGAAGAGCAAGAGTTGGTTTAAAAAATCCAAATAGGCCCATCGCAAGTTTTATC TTTTCAGGACCTACTGGTGTAGGAAAAACTGAATTGACTAAATCATTAGCTTCCTACTTCTTCGGTAGCGAAGAAGCCAT GATTAGATTAGATATGTCAGAATTTATGGAAAGACATACTGTTAGTAAACTTATAGGTTCCCCTCCGGGATATGTCGGTT TTAATGAAGGTGGTCAACTTACTGAGGCGGTTAGAAGAAGACCTTATACCGTTGTTTTATTTGATGAAGTAGAGAAAGCT CATCCAGATGTATTCAATTTGTTATTACAACTTCTTGAGGACGGTAGACTAACAGATTCCAAAGGTAGAACTGTAGATTT TAAAAATACTTTGCTAATAATGACTTCTAATATTGGTTCAAAAGTGATTGAGAAAGGTGGAGGCGGCTTAGGATTTGAGT TTTCTGGTGATTCTGTTGAAGATAGTCAATACAATAGAATTAAATCTTTAGTTAATGAAGAACTAAAGCAATACTTCAGA CCTGAATTTTTAAATAGACTTGATGAAATAATTGTATTCAGGCAACTATCTAAAAACGAGGTTAAAGAAATTGCTGAAAT TATGTTACAAGAGGTTTTTGCAAGACTAGAAGATAAGGGCATTAAATTAAGCGTAACTGATGCTTTCAAAGAAAGACTTG TTGAAGAAGGCTATAATCCTTCATATGGAGCACGACCCTTAAGAAGAGCTGTTATGCGATTATTAGAGGATAGTTTGGCT GAAGAAGTTCTTTCAGGAAGAATAAAAGATGGAGACAAGGCTTTAGTTGATATAGACGATAATAAAAAAGTTACAATCAA TATTTCTTCTGAAGAGTCTTCTCAAGAGTTAGCAAGTGCTAACTTTTAG Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLSIDLTKVRTQVIRMLGETAEVGSGANSSKGNLK TATLDEFGTNLTKLASESKLDPVVGRYAEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGDIPDILEDKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDEALEAAAHLGDRYISDRFLPDKAIDLIDEAG SRVRLINSKLPPEAKQIDKELRQIQKQKEESVRDQNFDQAGQLREKEIELSAKIKEVLENKKESTTEDESSVDTNSVKND SKLLQNPMVNEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFI FSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKA HPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR PEFLNRLDEIIVFRQLSKNEVKEIAEIMLQEVFARLEDKGIKLSVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLA EEVLSGRIKDGDKALVDIDDNKKVTINISSEESSQELASANF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PMT9312_1099 | YP_397594.1 | Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| PMT9312_1099 | YP_397594.1 | Clp protease ATP-binding subunit | VFG0080 | Protein | 8e-150 | 47 |
