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Name : nrdE (LSA0941) Accession : YP_395552.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 927727 - 929898 bp Length : 2172 bp Strand : - Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : ATGTCTTTAAAAGAGATTAAAACTGAAAACGTAACTTATTATGAATTGAATAACCAAATCAACATTCCGGTTAACGGTCA AATCCCCCTTCAAAAGGATCAAGAAGCACTAGAAGCCTTTTTAGAACAAAATGTGCAACCCAACATGGTGACTTTTAAAT CACTACAAGATCGCTTAAATTACATGGTGGCTGAAAACTATTACGAAGCGGATTTTCTAAAGGCCTACTCAATCGATTTT ATGGAACGCTTAAACCAATATTTAATCGATCAAGACTTTCATTTTAAATCTTTCATGGCAGCTTATAAGTTTTATGCGCA ATACGCTCTTAAAACAAATGATAACGGCTTTTACTTAGAAGACTTTAAAGACCGGGTCTTCACCAACGCGCTCTATTTTG CGGATGGTGACGAAGCCCTTGCAATGAGTGTTGCTGATGAAATGATCCATCAACGTTACCAACCAGCGACGCCTACCTTC TTAAATGCGGGACGTTCTCGTCGTGGTGAATTAGTGTCATGTTTCTTATTGCAAACAACCGACGATATGAATTCAATTGG CCGGACCATCAACTCTGCTCTTCAATTATCACGAATTGGTGGTGGCGTCGGGATTAGCTTGTCTAACTTGCGTGGTGCTG GTGATCCAATCAAAGGCATCGACGGTGCTGCAAGTGGTGTCTTACCTGTTATGAAATTATTAGAGGATTCATTCTCTTAT TCCAACCAATTAGGGCAACGTCAAGGCGCTGGTGTTGTTTATCTGAACGTTTTCCATCCAGACGTCGTGGCTTTCTTGGG TGCTAAAAAAGAAAATGCGGACGAAAAATATCGGTTAAAGACCCTCTCACTAGGCTTAACAGTGCCAGATAAGTACTATG AATTAGTCAAAGAAGACGCTGATATGTATCTCTTCAGCCCATATAGTGTTGAACGTGAATACGGCCAACCTTTCTCATAC ATCGATATTACGGCCGAATATGACAACTTAGTGGCTAACGAAGCGATTAAGAAGACGAAAATTAAAGCCCGTGATTTAGA AAATGAAATTAGCAAGCTCCAACAAGAATCAGGTTACCCTTATATCGTGAATATCGATACGGCTAATAAAGCCAACCCAA TTGACGGTAAAATTATCATGAGTAACCTTTGTTCTGAAGTCTTACAAGTGCAAACCCCTTCTCAAATTAACAATCGTCAA GAATATGACGTTTTAGGAACTGATATTAGCTGTAATTTAGGTTCAACTAATATTCCGAACATGATGACCTCTCCTGATTT TGGCCATTCAATTGAAACGATGGTTCGTTCATTAACTTATGTGACCGATCATTCTGATATCGATGTTGTCCCTTCTGTGG CACATGGGAACCAATTAGCCCACACAATCGGCTTAGGCGGCATGGGCTTGCACACCTACTTCGCTAAGAATCAAATGATG TACGGTTCAGAAGAATCAATCGACTTTACAAGCAATTACTTTATGTTATTGAACTACTGGACATTAGTTGCTTCAAACAA GATTGCTAAAGAACGTGGGATTACTTTTGATAATTTTGAAAACAGTAAGTACGCTGATGGTAGTTACTTTGATCAATACC TGAATACTGAATGGGCGCCTAAGACGGCTAAAGTCAAAGGATTATTCGACGGCGTCTTCATCCCGACCCAAGCAGACTGG GCCGCTTTGAAAGAAGCGATTATGCAAGATGGGTTATATCATCAAAACAGACTCGCAGTTGCACCTAATGGCTCAATCTC ATATATTAACGATACTTCGGCTAGTCTCCAACCAATTGTCAACCGCGTTGAAGATCGCCAAGAAAAGAAAATTGGGACAA TTTACTACCCAGCACCAGGTCTATCAAACGAAACGATGCCTTATTATGAATCAGCCTATGACATCGATATGCGTAAAGTA ATCGACATCTATGCTGCTGCACAAAAACACGTTGATCAAGGGATGAGTATGACACTCTTCATGCGTTCAACAATTCCAGC TGGCTTATACGACTGGAAAGACGGTCGCACAGATAAGATGACGACCCGTGATCTTAACATTCTCAGAAACTACGCGCATC ATAAAAGTATTAAATCAATCTACTATATCCGCACATATACGGACGACGAAAACGAAGTCGGCGCAAACGCATGTGAAAGC TGCGTAATCTAA Protein sequence : MSLKEIKTENVTYYELNNQINIPVNGQIPLQKDQEALEAFLEQNVQPNMVTFKSLQDRLNYMVAENYYEADFLKAYSIDF MERLNQYLIDQDFHFKSFMAAYKFYAQYALKTNDNGFYLEDFKDRVFTNALYFADGDEALAMSVADEMIHQRYQPATPTF LNAGRSRRGELVSCFLLQTTDDMNSIGRTINSALQLSRIGGGVGISLSNLRGAGDPIKGIDGAASGVLPVMKLLEDSFSY SNQLGQRQGAGVVYLNVFHPDVVAFLGAKKENADEKYRLKTLSLGLTVPDKYYELVKEDADMYLFSPYSVEREYGQPFSY IDITAEYDNLVANEAIKKTKIKARDLENEISKLQQESGYPYIVNIDTANKANPIDGKIIMSNLCSEVLQVQTPSQINNRQ EYDVLGTDISCNLGSTNIPNMMTSPDFGHSIETMVRSLTYVTDHSDIDVVPSVAHGNQLAHTIGLGGMGLHTYFAKNQMM YGSEESIDFTSNYFMLLNYWTLVASNKIAKERGITFDNFENSKYADGSYFDQYLNTEWAPKTAKVKGLFDGVFIPTQADW AALKEAIMQDGLYHQNRLAVAPNGSISYINDTSASLQPIVNRVEDRQEKKIGTIYYPAPGLSNETMPYYESAYDIDMRKV IDIYAAAQKHVDQGMSMTLFMRSTIPAGLYDWKDGRTDKMTTRDLNILRNYAHHKSIKSIYYIRTYTDDENEVGANACES CVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 2e-180 | 51 |
