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Name : LSA0586 (LSA0586) Accession : YP_395201.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : site-specific recombinase, prophage lsa1 integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 595887 - 597044 bp Length : 1158 bp Strand : - Note : - DNA sequence : ATGGCGACAATTAAGAAATACACTAAAGACAATCAAGAATTTTATATGTTCCAAGCCTACTTAGGCATCAACCCACAAAC AGGTAAAGAAAAACGCACCACTAGACGGGGCTTCAAAACCCGAAAAGAGGCGCGCTTAGCATTATCTATGCTTGAATTAC AAGCAGATAGTGGCCAATTAGACCAGCAACCTATTAACCTAACGTTTGAAGACGTCTACCAGCAGTGGTGGGCCGGTTAT ATTAATACGGTTCGTGAAAGTACGATGTATAAGCAGAAAAAAGTGTTTCAAAACCACATCCTTCCTGCTTTTGGTAAGTA TCGTATTAGAACGATCACTACCAGCCAAGTTCAAACCACCCTAAATAAATGGTTTAAACAAACAGATTATAGTTTTAAGC CGTGGTTTAATTACACGAGTGCTATCTTTAAATACGCTATCTTACAAGGTTATATTAAGGACAACCCATGCACACGCGTT ACAATGCCTAAAAAATTAGATAAAGAGGATACTCTTAATTTTTGGGATAAGGATCAGCTTAAAACATTCTTTAATGGCAT TGATCCAGTTAATGACTTAGAGAAATACACTCTCTTTCGTGTACTTGCTTTTACTGGGATTAGACGTGGCGAGTGCTTAT CTCTTACTTGGGATGATTTGAACGTTCAAAAAGCCACACTAGATATTAATAAGACGTTAACGCATGGTGATAAAGGTCGG TTACTAATCCAACCCACCAAAACAAAAAAAGGTACCCGCGTCATCTCACTTGACGAAAGCACCTTACTTTATTTAAAGAA ATGGCATTTAGAGCAACGCCGCATGTATTTAATGCTAGGCTACAATATCAACAAAAGCAACCAACTAATTTTTGCAACTT CTAAGAATACTTTTAAATCTCTTAATACCCCCAGTAAATGGCTAAGAGCGCTTATTGATGATGCTAATAAGAGTGGGGCT AATTTACCCAGTATTACCGTACACGGCTTTAGGCATAGCCATGCTAGTGCCTTGTTCAGTGCTGGGGCATCGATTAAAGA GGTTCAAGAACGATTAGGCCACGAGGATGCCCAAACAACCTTAAATATTTATACGCACGTTACCGAAAAACAAGGCCAAG AAGCAGTTCAAAAACTGGTCAATTTTTTGAATTTCTAG Protein sequence : MATIKKYTKDNQEFYMFQAYLGINPQTGKEKRTTRRGFKTRKEARLALSMLELQADSGQLDQQPINLTFEDVYQQWWAGY INTVRESTMYKQKKVFQNHILPAFGKYRIRTITTSQVQTTLNKWFKQTDYSFKPWFNYTSAIFKYAILQGYIKDNPCTRV TMPKKLDKEDTLNFWDKDQLKTFFNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTLTHGDKGR LLIQPTKTKKGTRVISLDESTLLYLKKWHLEQRRMYLMLGYNINKSNQLIFATSKNTFKSLNTPSKWLRALIDDANKSGA NLPSITVHGFRHSHASALFSAGASIKEVQERLGHEDAQTTLNIYTHVTEKQGQEAVQKLVNFLNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAPIG0469 | YP_005733279.1 | integrase | Not tested | SAPI-S0385 | Protein | 4e-51 | 43 |
| SAOV_0414c | YP_005735930.1 | integrase | Not tested | SaPI1 | Protein | 3e-51 | 43 |
| SAB0342c | YP_415844.1 | integrase | Not tested | SaPIbov | Protein | 3e-51 | 43 |
| unnamed | AAG29618.1 | integrase-like protein | Not tested | SaPIbov | Protein | 2e-51 | 43 |
| sip | AAP55251.1 | integrase protein | Not tested | SaPIbov2 | Protein | 2e-54 | 43 |
