Gene Information

Name : LSA0426 (LSA0426)
Accession : YP_395039.1
Strain : Lactobacillus sakei 23K
Genome accession: NC_007576
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 435366 - 435698 bp
Length : 333 bp
Strand : -
Note : -

DNA sequence :
ATGACAATCGACCACGATCAACTGATTCGCTCCGTTCAAAAAACACTTCCGAAAGAAGACACGCTCGATCATATCTCAAC
ACTTTTTAAAATTCTTGGCGATAAGACCCGCGCTAAAATTCTGTACGCACTCTTCCAATCAGAATTACGGGTTTACGATA
TCGTCAGCGTTTTAGAGATGTCGCAATCTTCTATCTCACATCAACTACGGGTACTCAAACAAGCAAAGCTCGTTAAGAGT
CGCAAAGAGGGCAAAGAAGTTTACTACTCCCTTGCTGACAACCATGTGATTAACATCTTCTCACAAGTCATCGCGCACGT
TAACGAGCACTAA

Protein sequence :
MTIDHDQLIRSVQKTLPKEDTLDHISTLFKILGDKTRAKILYALFQSELRVYDIVSVLEMSQSSISHQLRVLKQAKLVKS
RKEGKEVYYSLADNHVINIFSQVIAHVNEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 8e-16 41
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 8e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LSA0426 YP_395039.1 ArsR family transcriptional regulator BAC0456 Protein 4e-18 41