Gene Information

Name : LSA0376 (LSA0376)
Accession : YP_394989.1
Strain : Lactobacillus sakei 23K
Genome accession: NC_007576
Putative virulence/resistance : Unknown
Product : transporter
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 380156 - 381715 bp
Length : 1560 bp
Strand : +
Note : -

DNA sequence :
ATGGATGATGCTGAAATAATCAAGACTAAGAAGCGGTTTAAACTTAAAATGCCGGGGGCTTTTGTGATCCTCTTCATACT
GACAGTGGTCGCGGTGATGGCGACGTGGGTTGTGCCGTCAGGATCTTACGCGAAGTTATCGTATGACCAAAAGAGTACGC
AACTGGTCGTGACAAAACCATCAGGTCAAGTTGAAAAGGTGCCAGCAACACAGGCATCATTAGACCGACTCGGCGTTAAA
ATCAAAATTAGTCAATTCACTTCTGGCAGTATTAATGCAGCCGTATCGATTCCCAATACCTACCAAAGATTGAAACAACG
GCCGGCCAGTTTAGCAGCTGTTCCTAACAGTATGGTTCGTGGGACCGTTGAAGCTGTCGATATTATGGTTTTTATTTTAG
TATTAGGGGGCTTGATTGGCACGGTCAAGGCTAGCGGCGCATTTGAGTCGGGGCTGTTGGCCTTAACCAAGAAAACAAAA
GGTCACGAATTTTTGTTAATCTTTTTCGTCGCGATTCTCATGGTTCTAGGCGGGACTTTATGTGGGATTGAAGAAGAGGC
GGTGGCCTTTTATCCAATTTTAGTACCGGTCTTTATTGCGATGGGGTACGATTCGATTGTTTGTGTGGGGGCGATTTTCC
TTGCCAGTTCAATTGGCACGACTTTCTCGACCATTAACCCCTTTTCAGTTGTGATTGCTTCTAACGCCGCGGGTATTAGT
TTCACGGAAGGCTTGTTGTGGCGAGTTGGCGGCTGTATCGTAGGGGCCATTTTTGTCATTTATTATCTCTATCGCTATTC
TAAAAAGGTCAAGGCTGATCCGACCCAATCGTATTCATATGAAGATCACGACGCTTTTGATAAGATGTGGGCAATTACAT
CTGAGGGGGCGCAGTCAAAAGCCGTTTTTACCTGGCGGAAGAAATTAATTCTGGTCTTATTTGTGGTGACCTTCCCGATT
ATGGTCTGGGGCGTTATGTCTCAAGGGTGGTGGTTCCCAACGATGGCGGCGTCATTTTTAACATTTGCGATTATCATCAT
GTTTTTAACCGCGACAGGACCAGAGGGCATTGGCGAAAAAGGGGTTATCGACGCTTTTGTGAACGGTGCTTCTAGTTTAG
TGGGCGTCTCGCTCATTATTGGTCTTGCGCGAGGGATTAACTTGATTATGAATGAAGGGATGATTTCAGATACCTTATTA
CAATATTCGTCATCATTAGTCGCACATGTTAGTGGTCCGATTTTTATTTTGATCATGTTAGTGATATTCTTCGTGCTTGG
CTTTATCGTTCCATCTTCTTCGGGACTAGCCGTCTTATCGATGCCGATTTTAGCACCGTTAGCAGATACGGTTAATATTC
CCCGATTTGTTGTGGTAACGGCCTATCAATTTGGGCAATACGCAATGTTGTTCTTGGCACCAACTGGCTTGGTAATGGCC
ACCTTACAAATGTTAGATGTTAAATACGCTCACTGGTTACGGTTCGTTTGGCCAGTAGTCGCTTTTGTGCTGACTTTTGG
TGGGGCCATGTTAGTCTTACAAGTCCTAATTTATTCGTAA

Protein sequence :
MDDAEIIKTKKRFKLKMPGAFVILFILTVVAVMATWVVPSGSYAKLSYDQKSTQLVVTKPSGQVEKVPATQASLDRLGVK
IKISQFTSGSINAAVSIPNTYQRLKQRPASLAAVPNSMVRGTVEAVDIMVFILVLGGLIGTVKASGAFESGLLALTKKTK
GHEFLLIFFVAILMVLGGTLCGIEEEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTTFSTINPFSVVIASNAAGIS
FTEGLLWRVGGCIVGAIFVIYYLYRYSKKVKADPTQSYSYEDHDAFDKMWAITSEGAQSKAVFTWRKKLILVLFVVTFPI
MVWGVMSQGWWFPTMAASFLTFAIIIMFLTATGPEGIGEKGVIDAFVNGASSLVGVSLIIGLARGINLIMNEGMISDTLL
QYSSSLVAHVSGPIFILIMLVIFFVLGFIVPSSSGLAVLSMPILAPLADTVNIPRFVVVTAYQFGQYAMLFLAPTGLVMA
TLQMLDVKYAHWLRFVWPVVAFVLTFGGAMLVLQVLIYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 0.0 75
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 0.0 75
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 0.0 75
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 0.0 75
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 0.0 75
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 0.0 75