|
Name : arcB (LSA0371) Accession : YP_394984.1 Strain : Lactobacillus sakei 23K Genome accession: NC_007576 Putative virulence/resistance : Unknown Product : ornithine carbamoyltransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0078 EC number : 2.1.3.3 Position : 374598 - 375614 bp Length : 1017 bp Strand : + Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway DNA sequence : ATGACAAACAGCGTATTTCAAGGCAGAAGTTTATTAGCAGAAAAAGATTTTACTAAATCAGAACTCGAATACTTAATCGA TTTCTCATTACATTTGAAGGATTTAAAGAAAAAAGGGATTCCACATCACTATCTAGAAGGTAAGAACATTGCCTTACTAT TTGAAAAAAATTCAACCAGAACGCGTGCTGCTTTTACAACAGCTGCCATTGACTTAGGGGCTCACCCAGAATTCTTAGGT AAAAATGATATTCAACTTGGTAAAAAAGAATCAGTTGAAGATACAGCCAAAGTATTAGGAAGCATGTTTGATGGCATTGA ATTCCGTGGCTTTAGCCAAAAAGTGGTTGAAGACTTAGCTAAATACTCAGGTGTTCCTGTATGGAATGGTTTAACTGACG AATGGCATCCAACACAAATGATTGCTGATTTTATGACAGTTAAAGAAAACTTCGGCAAGTTAAAAGGTGTGACATTAACT TATGTTGGTGATGGCCGTAACAACATGGCTAACAGCTTGTTAGTAACAGGTTCAATGTTAGGCGTAAATATCCACATCGT TGCCCCAGATTCATTACAACCAACACAAGAAGTCCGTGATTTAGCTGAAGGTTACGCTAAAGAAACAGGCAGCAAGAACA TGATTACTTCAGACGTTGACGCTGGTGTTAAAGGCTCAGATGTTTTATACACAGACGTTTGGGTTTCAATGGGTGAAGAA GATAAGTTTGAAGAACGGGTTAACTTGTTGAAACCATACCAAATCAACATGGACATGGTTAAGAAGACCGGTAACGAAAA CATGATTATCATGCACTGTTTACCAGCTTTCCATGATATTGAAACTGAATATGGTAAGAAGATTGACGAACAATTCGGTA TTCAAGAAATGGAAATTACTGACGAAGCATTCAGAAGCAAATATGCCCGTCAATTTGAAGAAGCTGAAAACAGAATGCAC TCAATCAAAGCAATCATGGCAGCAACATTAGGCAACTTATTCATACCTCAAGCATAA Protein sequence : MTNSVFQGRSLLAEKDFTKSELEYLIDFSLHLKDLKKKGIPHHYLEGKNIALLFEKNSTRTRAAFTTAAIDLGAHPEFLG KNDIQLGKKESVEDTAKVLGSMFDGIEFRGFSQKVVEDLAKYSGVPVWNGLTDEWHPTQMIADFMTVKENFGKLKGVTLT YVGDGRNNMANSLLVTGSMLGVNIHIVAPDSLQPTQEVRDLAEGYAKETGSKNMITSDVDAGVKGSDVLYTDVWVSMGEE DKFEERVNLLKPYQINMDMVKKTGNENMIIMHCLPAFHDIETEYGKKIDEQFGIQEMEITDEAFRSKYARQFEEAENRMH SIKAIMAATLGNLFIPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| argF | YP_493760.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 6e-78 | 56 |
| argF | NP_645867.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-78 | 56 |
| argF | NP_371693.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-78 | 56 |
| argF | NP_374285.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-78 | 56 |
| SE0103 | NP_763658.1 | ornithine carbamoyltransferase | Not tested | SCCpbp4 | Protein | 4e-80 | 56 |
| arcB1 | YP_186044.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 6e-78 | 56 |
| SAKOR_01090 | YP_008491278.1 | Ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 3e-78 | 56 |
